FFCP PHASE1:Hg19::chr5:115420690..115420751,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:115420690..115420751,+
|short_description=p1@COMMD10
|description=CAGE_peak_1_at_COMMD10_5end
|association_with_transcript=0bp_to_ENST00000507356,NM_016144...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51397 | |EntrezGene=51397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30201 | |HGNC=30201 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC04,Q9Y6G5 | |UniProt=D6RC04,Q9Y6G5 | ||
|association_with_transcript=0bp_to_ENST00000507356,NM_016144,uc003krt.1_5end | |||
|cluster_id=chr5:115420690..115420751,+ | |||
|description=CAGE_peak_1_at_COMMD10_5end | |||
|id=chr5:115420690..115420751,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.67e-20!119;CL:0002031!8.55e-20!124;CL:0000738!6.01e-18!140;CL:0000037!1.09e-17!172;CL:0000566!1.09e-17!172;CL:0002032!2.17e-15!165;CL:0000837!2.17e-15!165;CL:0000988!2.35e-14!182;CL:0000542!1.10e-11!53;CL:0000051!1.10e-11!53;CL:0000838!2.19e-11!52;CL:0000557!6.28e-10!71;CL:0000839!1.95e-09!70;CL:0002194!1.47e-08!63;CL:0000576!1.47e-08!63;CL:0000040!1.47e-08!63;CL:0000559!1.47e-08!63;CL:0002009!2.49e-08!65;CL:0000766!2.15e-07!76;CL:0000236!3.27e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.95e-08;53!CL:0000236;7.29e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.98e-22,115;CL:0002031,6.03e-21,120;CL:0000738,6.43e-19,136;CL:0000037,1.64e-18,168;CL:0002032,3.73e-16,161;CL:0000837,3.73e-16,161;CL:0000988,1.58e-15,177;CL:0000542,1.10e-11,53;CL:0000051,1.10e-11,53;CL:0000838,2.19e-11,52;CL:0000557,5.89e-11,67;CL:0000839,1.96e-10,66;CL:0002194,1.48e-09,59;CL:0000576,1.48e-09,59;CL:0000040,1.48e-09,59;CL:0000559,1.48e-09,59;CL:0002009,2.78e-09,61;CL:0000766,3.71e-08,72;CL:0000236,3.27e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.95e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-13!115;UBERON:0002390!9.30e-09!102;UBERON:0003061!9.30e-09!102;UBERON:0002193!2.94e-08!112;UBERON:0002371!8.27e-08!80;UBERON:0001474!2.10e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.21e-13,114;UBERON:0002390,1.83e-09,98;UBERON:0003061,1.83e-09,98;UBERON:0002405,5.18e-09,93;UBERON:0002193,6.90e-09,108;UBERON:0002371,1.41e-08,76;UBERON:0001474,4.22e-08,82;UBERON:0004765,2.36e-07,90 | |||
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| ||
|short_description=p1@COMMD10 | |||
}} | }} |
Latest revision as of 20:21, 19 September 2015
Short description: | p1@COMMD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COMMD10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000507356, NM_016144, uc003krt.1_5end |
EntrezGene: | COMMD10 |
HGNC: | 30201 |
UniProt: | D6RC04Q9Y6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 9.98e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 6.03e-21 | 120 |
leukocyte | 6.43e-19 | 136 |
hematopoietic stem cell | 1.64e-18 | 168 |
hematopoietic oligopotent progenitor cell | 3.73e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.73e-16 | 161 |
hematopoietic cell | 1.58e-15 | 177 |
lymphocyte | 1.10e-11 | 53 |
common lymphoid progenitor | 1.10e-11 | 53 |
lymphoid lineage restricted progenitor cell | 2.19e-11 | 52 |
granulocyte monocyte progenitor cell | 5.89e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.96e-10 | 66 |
monopoietic cell | 1.48e-09 | 59 |
monocyte | 1.48e-09 | 59 |
monoblast | 1.48e-09 | 59 |
promonocyte | 1.48e-09 | 59 |
macrophage dendritic cell progenitor | 2.78e-09 | 61 |
myeloid leukocyte | 3.71e-08 | 72 |
B cell | 3.27e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.21e-13 | 114 |
hematopoietic system | 1.83e-09 | 98 |
blood island | 1.83e-09 | 98 |
immune system | 5.18e-09 | 93 |
hemolymphoid system | 6.90e-09 | 108 |
bone marrow | 1.41e-08 | 76 |
bone element | 4.22e-08 | 82 |
skeletal element | 2.36e-07 | 90 |