FFCP PHASE1:Hg19::chr5:121400124..121400144,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:121400124..121400144,-
|short_description=p@chr5:121400124..121400144,-
|description=CAGE_peak_at_chr5:121400124..121400144,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:121400124..121400144,- | |||
|description=CAGE_peak_at_chr5:121400124..121400144,- | |||
|id=chr5:121400124..121400144,- | |||
|ontology_enrichment_celltype=CL:0000055!6.53e-20!180;CL:0000057!4.21e-15!75;CL:0002620!1.06e-08!23;CL:0002334!1.85e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.92e-15;12!CL:0000135;1.32e-10;3!CL:0000388;1.32e-10;3!CL:0002579;7.60e-10;3!CL:0002580;1.23e-09;3!CL:0002617;1.19e-07;2!CL:0000499;2.15e-07;28!CL:0002195;4.22e-07;2!CL:0002571;4.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.45e-15,12;CL:0000135,1.42e-10,3;CL:0000388,1.42e-10,3;CL:0002580,5.40e-10,3;CL:0002579,1.38e-09,3;CL:0000057,1.53e-09,76;CL:0002617,1.36e-07,2;CL:0000499,2.16e-07,28;CL:0002583,5.03e-07,2;CL:0002195,6.21e-07,2;CL:0002571,6.21e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.54e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3350;6.02e-08;2!DOID:2394;3.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,6.48e-08,2;DOID:2394,2.51e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.05e-11;9!UBERON:0000042;1.05e-11;9!UBERON:0007846;1.32e-10;3!UBERON:0000043;1.32e-10;3!UBERON:0007845;1.32e-10;3!UBERON:0003688;3.00e-08;6!UBERON:0002358;3.00e-08;6!UBERON:0003684;3.00e-08;6!UBERON:0001178;3.00e-08;6!UBERON:0000310;1.34e-07;10!UBERON:0001443;7.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.42e-10,3;UBERON:0000043,1.42e-10,3;UBERON:0007845,1.42e-10,3;UBERON:0004457,1.89e-08,12;UBERON:0000042,1.89e-08,12;UBERON:0003688,5.42e-08,6;UBERON:0002358,5.42e-08,6;UBERON:0003684,5.42e-08,6;UBERON:0001178,5.42e-08,6;UBERON:0000310,9.59e-08,10;UBERON:0001443,5.29e-07,11 | |||
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| |phase1_expression=2.18014055124668,3.63970890614671,1.12763523276777,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,0.722878304769133,1.00267582127178,1.73815822752988,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,5.96366342034382,0.886413581652058,0.662045904066094,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.206651562351531,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.751190294532984,0.340296549480063,1.25572744982203,1.49490172172997,0.635795703478686,0.600182192168805,0,0,0.37223371266318,2.86919764810153,0.292311015483596,1.00973509697646,0.736399189138395,0,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0.266422179016099,2.57360388584666,0,0,0,1.06617584622764,0,0.602878754119172,0,2.0994328148232,0,0,0,0.718874566474748,0,0,1.73737568001095,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,0.500170521059677,0,2.70362119990049,2.85486382075459,2.52323864054295,0.585707074963566,0,0,0,1.99267679560631,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,1.98486246255021,1.68808170616869,2.52594084989766,1.28139149255701,1.02341449813341,5.46903331888265,0,1.69630663182921,1.77561725313127,0.9033987161519,0.519254429183621,0,0,0,0.0920809889358963,0.114814448164607,1.45672934405374,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0.154048617114644,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,1.07923474549989,0.54907405947211,0.235624804691373,0,0,0,0,0.731140468893853,0,0.272999822815972,0.848432591722276,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0.196498082026242,0.7133421029625,0,3.16661452946496,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0.667852230137435,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1595809741485,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,2.14882720709979,0,0,0,1.43574604915363,0,0,0,0.268733889946905,5.04419836959365,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,2.17199840701485,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0.447764408660622,1.40227985908335,0,0.189403005275089,0.50313580350515,0.889811221596536,0,1.05861646634267,0.466311601748341,0.147855149989634,0.159296767163702,0,0.155262956876259,1.65882483136342,1.32920857278997,2.60872530905867,0.450772826991655,3.04644169735036,0,0.363697318405119,0.429642228169954,1.39210127963548,1.99047944349308,0.400027764663154,0.343395705182793,2.35724642136143,0,0,0.214441591374926,0,0.680117776536817,0.694567422971502,0.489473409012935,0.537266523244462,0,0.219284049578707,0.176689145945881,0.192914038270915,1.18259708457151,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66967466827017,0,0,0.150420656698515,0.80682027481408,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,1.9110067515482,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,2.91426595835484,0,0,0,0,0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| ||
|short_description=p@chr5:121400124..121400144,- | |||
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Latest revision as of 09:06, 30 July 2015
Short description: | p@chr5:121400124..121400144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121400124..121400144, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.45e-15 | 12 |
fibrocyte | 1.42e-10 | 3 |
tendon cell | 1.42e-10 | 3 |
preadipocyte of the breast | 5.40e-10 | 3 |
omentum preadipocyte | 1.38e-09 | 3 |
fibroblast | 1.53e-09 | 76 |
adipocyte of breast | 1.36e-07 | 2 |
stromal cell | 2.16e-07 | 28 |
subcutaneous preadipocyte | 5.03e-07 | 2 |
hepatic stem cell | 6.21e-07 | 2 |
hepatic mesenchymal stem cell | 6.21e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.42e-10 | 3 |
tendon | 1.42e-10 | 3 |
regular connective tissue | 1.42e-10 | 3 |
cavity lining | 1.89e-08 | 12 |
serous membrane | 1.89e-08 | 12 |
omentum | 5.42e-08 | 6 |
peritoneum | 5.42e-08 | 6 |
abdominal cavity | 5.42e-08 | 6 |
visceral peritoneum | 5.42e-08 | 6 |
breast | 9.59e-08 | 10 |
chest | 5.29e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 6.48e-08 | 2 |
ovarian cancer | 2.51e-07 | 14 |