FFCP PHASE1:Hg19::chr6:10420285..10420304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-393bp_to_ENST00000473652_5end | |association_with_transcript=-393bp_to_ENST00000473652_5end | ||
|cluster_id=chr6:10420285..10420304,- | |||
|description=CAGE_peak_18_at_TFAP2A_5end | |description=CAGE_peak_18_at_TFAP2A_5end | ||
|id=chr6:10420285..10420304,- | |id=chr6:10420285..10420304,- |
Latest revision as of 13:09, 19 September 2015
Short description: | p18@TFAP2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -393bp_to_ENST00000473652_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p18@TFAP2A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.07e-28 | 5 |
protein secreting cell | 1.18e-23 | 6 |
acinar cell of salivary gland | 2.02e-17 | 3 |
epithelial cell | 1.17e-16 | 253 |
glandular epithelial cell | 1.03e-15 | 9 |
sebum secreting cell | 8.86e-13 | 2 |
epithelial cell of sweat gland | 8.86e-13 | 2 |
epithelial cell of skin gland | 8.86e-13 | 2 |
acinar cell of sebaceous gland | 8.86e-13 | 2 |
mammary gland epithelial cell | 1.06e-12 | 4 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
larynx | 2.53e-50 | 9 |
upper respiratory tract | 4.72e-23 | 19 |
respiratory primordium | 3.78e-16 | 38 |
endoderm of foregut | 3.78e-16 | 38 |
respiratory system | 4.00e-16 | 74 |
skin gland | 8.86e-13 | 2 |
epidermis gland | 8.86e-13 | 2 |
gland of integumental system | 8.86e-13 | 2 |
sebaceous gland | 8.86e-13 | 2 |
skin sebaceous gland | 8.86e-13 | 2 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.23e-13 | 106 |
cell type cancer | 6.21e-09 | 143 |
Showing 1 to 2 of 2 entries