FFCP PHASE1:Hg19::chr5:132149229..132149251,+: Difference between revisions
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|id=chr5:132149229..132149251,+
|short_description=p5@SOWAHA
|description=CAGE_peak_5_at_SOWAHA_5end
|association_with_transcript=196bp_to_ENST00000378693,NM_175873...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=134548 | |EntrezGene=134548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27033 | |HGNC=27033 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M3V2 | |UniProt=Q2M3V2 | ||
|association_with_transcript=196bp_to_ENST00000378693,NM_175873,uc003kxw.2_5end | |||
|cluster_id=chr5:132149229..132149251,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_5_at_SOWAHA_5end | |||
|id=chr5:132149229..132149251,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.61e-08!5;CL:0000457!1.61e-08!5;CL:0002191!1.61e-08!5;CL:0000097!1.61e-08!5;CL:0000831!1.61e-08!5;CL:0002028!1.61e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-17!115;UBERON:0005409!3.75e-13!35;UBERON:0000160!8.00e-12!27;UBERON:0001869!6.38e-11!32;UBERON:0000059!2.38e-10!11;UBERON:0000369!3.00e-10!4;UBERON:0002435!3.00e-10!4;UBERON:0000204!3.00e-10!4;UBERON:0010082!3.00e-10!4;UBERON:0001893!3.43e-10!34;UBERON:0002780!6.16e-10!41;UBERON:0001890!6.16e-10!41;UBERON:0006240!6.16e-10!41;UBERON:0003080!1.18e-09!42;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0002791!1.73e-08!33;UBERON:0001155!2.24e-08!9;UBERON:0002020!3.34e-08!34;UBERON:0003528!3.34e-08!34;UBERON:0001049!5.93e-08!57;UBERON:0005068!5.93e-08!57;UBERON:0006241!5.93e-08!57;UBERON:0007135!5.93e-08!57;UBERON:0002420!9.01e-08!9;UBERON:0007245!9.01e-08!9;UBERON:0010009!9.01e-08!9;UBERON:0010011!9.01e-08!9;UBERON:0000454!9.01e-08!9;UBERON:0002616!1.30e-07!59;UBERON:0001017!7.74e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-49;17!UBERON:0002108;3.46e-45;4!UBERON:0005409;9.65e-39;22!UBERON:0001000;7.62e-26;1!UBERON:0005352;7.62e-26;1!UBERON:0004921;1.86e-24;33!UBERON:0000059;6.53e-21;11!UBERON:0001155;4.94e-12;9!UBERON:0001555;5.14e-11;54!UBERON:0002114;1.53e-09;2!UBERON:0006947;1.53e-09;3!UBERON:0004054;1.53e-09;3!UBERON:0000922;2.74e-09;49!UBERON:0001052;1.80e-07;4!UBERON:0005904;1.80e-07;4!UBERON:0001007;3.32e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-49,17;UBERON:0002108,2.98e-45,4;UBERON:0005409,2.17e-34,25;UBERON:0001000,1.26e-25,1;UBERON:0005352,1.26e-25,1;UBERON:0000059,5.70e-21,11;UBERON:0001155,4.94e-12,9;UBERON:0002114,1.41e-09,2;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0004921,1.29e-07,118;UBERON:0001052,1.59e-07,4;UBERON:0005904,2.04e-07,4 | |||
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| ||
|short_description=p5@SOWAHA | |||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p5@SOWAHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOWAHA_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 196bp_to_ENST00000378693, NM_175873, uc003kxw.2_5end |
EntrezGene: | SOWAHA |
HGNC: | 27033 |
UniProt: | Q2M3V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.69e-49 | 17 |
small intestine | 2.98e-45 | 4 |
gastrointestinal system | 2.17e-34 | 25 |
vas deferens | 1.26e-25 | 1 |
spermatic cord | 1.26e-25 | 1 |
large intestine | 5.70e-21 | 11 |
colon | 4.94e-12 | 9 |
duodenum | 1.41e-09 | 2 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
subdivision of digestive tract | 1.29e-07 | 118 |
rectum | 1.59e-07 | 4 |
duct of male reproductive system | 2.04e-07 | 4 |