FFCP PHASE1:Hg19::chr19:18284716..18284723,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10437 | |EntrezGene=10437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5398 | |HGNC=5398 | ||
|TSSclassifier=strong | |||
|UniProt=A6XNE3 | |UniProt=A6XNE3 | ||
|association_with_transcript=64bp_to_AB590284,CU676848,CU689078,DQ884410,DQ892016,DQ895206_5end | |association_with_transcript=64bp_to_AB590284,CU676848,CU689078,DQ884410,DQ892016,DQ895206_5end | ||
|cluster_id=chr19:18284716..18284723,+ | |||
|coexpression_cluster_id=C143 | |coexpression_cluster_id=C143 | ||
|description=CAGE_peak_2_at_IFI30_5end | |description=CAGE_peak_2_at_IFI30_5end |
Latest revision as of 14:11, 16 September 2015
Short description: | p2@IFI30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFI30_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 64bp_to_AB590284, CU676848, CU689078, DQ884410, DQ892016, DQ895206_5end |
EntrezGene: | IFI30 |
HGNC: | 5398 |
UniProt: | A6XNE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@IFI30 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.34e-86 | 48 |
phagocyte | 5.34e-86 | 48 |
monopoietic cell | 1.45e-85 | 59 |
monocyte | 1.45e-85 | 59 |
monoblast | 1.45e-85 | 59 |
promonocyte | 1.45e-85 | 59 |
macrophage dendritic cell progenitor | 2.07e-85 | 61 |
myeloid leukocyte | 3.99e-81 | 72 |
granulocyte monocyte progenitor cell | 6.19e-79 | 67 |
myeloid lineage restricted progenitor cell | 1.04e-74 | 66 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.04e-74 | 98 |
blood island | 4.04e-74 | 98 |
hemolymphoid system | 1.22e-69 | 108 |
bone marrow | 1.61e-67 | 76 |
bone element | 2.71e-61 | 82 |
immune system | 2.79e-60 | 93 |
skeletal element | 2.80e-54 | 90 |
skeletal system | 4.32e-47 | 100 |
lateral plate mesoderm | 1.66e-30 | 203 |
musculoskeletal system | 2.91e-23 | 167 |
Showing 1 to 10 of 18 entries