FFCP PHASE1:Hg19::chr5:176797862..176797889,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:176797862..176797889,+
|short_description=p3@RGS14
|description=CAGE_peak_3_at_RGS14_5end
|association_with_transcript=40bp_to_ENST00000514102_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10636 | |EntrezGene=10636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9996 | |HGNC=9996 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000514102_5end | |||
|cluster_id=chr5:176797862..176797889,+ | |||
|description=CAGE_peak_3_at_RGS14_5end | |||
|id=chr5:176797862..176797889,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-12!254;CL:0000223!1.06e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.10e-07;17!CL:0002518;1.10e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.85e-08,253;CL:1000497,7.69e-08,17;CL:0002518,7.69e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!9.89e-14!107;UBERON:0005172!5.82e-13!55;UBERON:0005173!5.82e-13!55;UBERON:0002417!8.39e-13!61;UBERON:0000916!8.39e-13!61;UBERON:0000466!9.73e-12!126;UBERON:0000481!1.53e-11!347;UBERON:0003104!1.21e-10!238;UBERON:0009142!1.21e-10!238;UBERON:0004119!2.91e-10!169;UBERON:0000925!2.91e-10!169;UBERON:0006595!2.91e-10!169;UBERON:0009569!3.46e-10!113;UBERON:0004921!6.67e-09!129;UBERON:0004185!6.67e-09!129;UBERON:0000464!8.60e-09!104;UBERON:0001007!1.14e-08!155;UBERON:0001555!1.14e-08!155;UBERON:0007026!1.14e-08!155;UBERON:0000077!1.86e-08!130;UBERON:0000475!3.82e-08!365;UBERON:0002113!1.03e-07!27;UBERON:0003918!1.03e-07!27;UBERON:0005095!1.03e-07!27;UBERON:0007687!1.03e-07!27;UBERON:0002100!1.26e-07!216;UBERON:0001041!2.32e-07!98;UBERON:0006554!4.61e-07!44;UBERON:0002553!5.73e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;7.41e-10;52!UBERON:0005173;7.41e-10;52!UBERON:0002113;1.11e-08;24!UBERON:0011143;1.11e-08;24!UBERON:0006554;1.90e-07;30!UBERON:0001008;1.90e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.44e-18,101;UBERON:0005172,4.55e-14,54;UBERON:0005173,4.55e-14,54;UBERON:0009569,6.53e-13,112;UBERON:0002417,6.48e-12,60;UBERON:0000916,6.48e-12,60;UBERON:0002113,3.06e-09,26;UBERON:0003918,3.06e-09,26;UBERON:0011143,3.06e-09,26;UBERON:0005095,3.06e-09,26;UBERON:0007687,3.06e-09,26;UBERON:0002100,1.36e-08,199;UBERON:0001041,6.79e-08,87;UBERON:0000489,3.41e-07,31;UBERON:0006554,6.30e-07,47 | |||
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|phase1_expression=0.726713517082227,0,0.422863212287913,0,0.893922188854576,0,0,0,0.261185628199839,0,0.697801167972428,1.31064823278103,1.05506791291381,0.495065411840187,0.331397375727916,1.34465029290355,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.626909442956176,0.286235987131057,0.684372125364421,1.38096903554283,0,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,1.50602959389125,0,0,0,0,0,0,0.217010870715852,1.11957737119962,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.946895611469467,0,0.557052284425868,0.294605907474837,0.221533894583621,0.541607727530031,0.384273959177026,0.520237390239513,0,0.552700035571697,0.579606171470105,0.593146252648242,0.802622484269139,0,0.566546713487831,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,2.43806866313962,2.68280343881454,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.378139268656271,0,0.087834785693126,1.37528029272598,1.09288586487763,0.370784442784429,0.649094787309367,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,1.22031028774085,0,0,0.357198913136319,0.898117490504679,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0,0.286836620748814,0,0.560677600142307,1.06748995729705,1.72667283892012,0.622422070799533,0.134710672069688,0.490385709340376,0.302714855289863,0,0.234321431833797,0.624320153660641,0,0,0.352303495931295,0,0.421352420106746,0,0.245668634623536,1.34323515528495,1.18800285728205,0,0.910161361938026,1.43723628363248,0,0.250237039743928,0.554128230968366,0,0.30648779579902,0,0.794025282120147,1.07633781413317,0.85422955527427,0,0.600182192168805,0.309157587715317,0.257640540045629,0.18611685633159,0,0.0974370051611986,1.00973509697646,0.368199594569197,0.323292113637624,1.06502877754984,0.302256294682921,0.169560592310488,0.966304265816484,0,0.573609190778008,0.365921118388786,0.397589304964456,0.464775771478074,1.45125477021519,1.26160425437814,0.36497735907583,0,0,1.38134921352481,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0,0.392442930250692,0.38474715694639,0.738155454624648,1.40241773803446,0.8231480226628,0,1.26755034821831,3.9313088667105,0.590789906681404,0,0.737930631258681,0.171567810298526,0.658501712451753,1.1240175325762,0.703702806881416,0.555530670951178,0.977424915930974,1.03993478527958,0,1.04337364477569,0.587043471179108,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0.93733833986777,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0,0.25248486685276,0.698476837213859,1.14596527667483,0,3.4214489204541,0.205654985406647,0.901029173531752,0.285826432630578,1.00917975910825,0.43596006883328,0.51336800074665,0.129271715757778,3.57656445851882,0.845302752556,0,0,1.28603687131071,0,0.799266537048298,0.428933980974443,0,0,0.65147236858747,1.06617584622764,0,1.50719688529793,0,1.09970290300263,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.502548796003046,0,0,2.99161459204025,0.828831026872071,0.36807447515742,2.00068208423871,0.542530047399471,0.415941723061614,0.356857977594324,0,0.585707074963566,0.601892199455438,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0.343143423810856,0,0.431428401637234,0,0.303127571446259,3.32870879020994,1.20956117331872,0.248107807818777,0,0,0.512556597022804,0.511707249066704,0.482561763430822,0,0.308419387605311,0.532685175939381,0.164254312027618,0,0.116210378459959,0.604297247958111,0.40101294060657,0.276242966807689,0.114814448164607,0.364182336013434,0.524497659837696,1.35359883872224,0.924184045252977,0.784349769176855,1.46139224653261,0.73886140225013,1.13733384070897,0,0.647747748306418,1.54227252690289,1.08378575017541,1.50506932156456,1.01950509218015,0.831076008928724,1.34324852833307,0,0.261435451024901,0.256450125116389,0.328014645699706,0.650756789328606,0.721287081534056,0.640986253728404,0.41254749960294,0,0.650060246036521,0,1.06337790121334,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.435050081742686,0.0852266274161009,0.801288320820636,0.826424576804891,0.192190067365106,0.765676274967505,1.11273558941105,0.464845549297286,0.94443704049192,0,0.616067160352178,0,0,0.37064843820784,0.858749320451947,1.116475108079,0,0.953150969619124,1.27948895655667,0,0.318203247925937,0,0,0.274537029736055,0.706874414074119,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,1.12678241012897,0.717056761020258,0.88424136911809,0,0,1.05553817648832,1.31717957183961,0,0.699869440489966,0.769776901804097,0,1.088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| ||
|short_description=p3@RGS14 | |||
}} | }} |
Latest revision as of 06:07, 17 September 2015
Short description: | p3@RGS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGS14_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000514102_5end |
EntrezGene: | RGS14 |
HGNC: | 9996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.85e-08 | 253 |
kidney cell | 7.69e-08 | 17 |
kidney epithelial cell | 7.69e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.44e-18 | 101 |
abdomen element | 4.55e-14 | 54 |
abdominal segment element | 4.55e-14 | 54 |
subdivision of trunk | 6.53e-13 | 112 |
abdominal segment of trunk | 6.48e-12 | 60 |
abdomen | 6.48e-12 | 60 |
kidney | 3.06e-09 | 26 |
kidney mesenchyme | 3.06e-09 | 26 |
upper urinary tract | 3.06e-09 | 26 |
kidney rudiment | 3.06e-09 | 26 |
kidney field | 3.06e-09 | 26 |
trunk | 1.36e-08 | 199 |
foregut | 6.79e-08 | 87 |
cavitated compound organ | 3.41e-07 | 31 |
urinary system structure | 6.30e-07 | 47 |