FFCP PHASE1:Hg19::chr5:32174369..32174458,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:32174369..32174458,-
|short_description=p1@GOLPH3
|description=CAGE_peak_1_at_GOLPH3_5end
|association_with_transcript=0bp_to_ENST00000265070,ENST000005036...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64083 | |EntrezGene=64083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15452 | |HGNC=15452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4A6,D6REM1,F5H7W9 | |UniProt=Q9H4A6,D6REM1,F5H7W9 | ||
|association_with_transcript=0bp_to_ENST00000265070,ENST00000503610,ENST00000512668,ENST00000542582,NM_022130,uc003jhp.1_5end | |||
|cluster_id=chr5:32174369..32174458,- | |||
|description=CAGE_peak_1_at_GOLPH3_5end | |||
|id=chr5:32174369..32174458,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;3.23e-08;86!UBERON:0008947;5.71e-07;29 | |||
|ontology_enrichment_disease=DOID:305!9.58e-15!106;DOID:0050687!2.75e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.58e-15,106;DOID:0050687,2.75e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.79e-15!155;UBERON:0001555!1.79e-15!155;UBERON:0007026!1.79e-15!155;UBERON:0004921!9.77e-13!129;UBERON:0004185!9.77e-13!129;UBERON:0004119!1.49e-12!169;UBERON:0000925!1.49e-12!169;UBERON:0006595!1.49e-12!169;UBERON:0000077!3.45e-11!130;UBERON:0001041!1.80e-09!98;UBERON:0009497!6.76e-08!25;UBERON:0000015!6.76e-08!25;UBERON:0002423!6.76e-08!25;UBERON:0006235!6.76e-08!25;UBERON:0004161!6.76e-08!25;UBERON:0003929!8.24e-08!54;UBERON:0009856!1.51e-07!26;UBERON:0007499!1.95e-07!25;UBERON:0009854!2.58e-07!23;UBERON:0008835!3.29e-07!22;UBERON:0003894!3.29e-07!22;UBERON:0001048!5.85e-07!168;UBERON:0001737!9.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.08e-08;25!UBERON:0001737;9.40e-07;9!UBERON:0001557;9.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.23e-14,145;UBERON:0001555,1.23e-14,145;UBERON:0007026,1.23e-14,145;UBERON:0004119,8.64e-12,160;UBERON:0000925,8.64e-12,160;UBERON:0006595,8.64e-12,160;UBERON:0004921,1.45e-11,118;UBERON:0001041,2.21e-08,87;UBERON:0009497,6.76e-08,25;UBERON:0000015,6.76e-08,25;UBERON:0002423,6.76e-08,25;UBERON:0006235,6.76e-08,25;UBERON:0004161,6.76e-08,25;UBERON:0003929,8.24e-08,54;UBERON:0009856,1.51e-07,26;UBERON:0007499,1.95e-07,25;UBERON:0009854,2.58e-07,23;UBERON:0008835,3.29e-07,22;UBERON:0003894,3.29e-07,22;UBERON:0001737,9.35e-07,9 | |||
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| ||
|short_description=p1@GOLPH3 | |||
}} | }} |
Latest revision as of 15:21, 17 September 2015
Short description: | p1@GOLPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GOLPH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265070, ENST00000503610, ENST00000512668, ENST00000542582, NM_022130, uc003jhp.1_5end |
EntrezGene: | GOLPH3 |
HGNC: | 15452 |
UniProt: | Q9H4A6D6REM1F5H7W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.23e-14 | 145 |
digestive tract | 1.23e-14 | 145 |
primitive gut | 1.23e-14 | 145 |
endoderm-derived structure | 8.64e-12 | 160 |
endoderm | 8.64e-12 | 160 |
presumptive endoderm | 8.64e-12 | 160 |
subdivision of digestive tract | 1.45e-11 | 118 |
foregut | 2.21e-08 | 87 |
epithelium of foregut-midgut junction | 6.76e-08 | 25 |
anatomical boundary | 6.76e-08 | 25 |
hepatobiliary system | 6.76e-08 | 25 |
foregut-midgut junction | 6.76e-08 | 25 |
septum transversum | 6.76e-08 | 25 |
gut epithelium | 8.24e-08 | 54 |
sac | 1.51e-07 | 26 |
epithelial sac | 1.95e-07 | 25 |
digestive tract diverticulum | 2.58e-07 | 23 |
hepatic diverticulum | 3.29e-07 | 22 |
liver primordium | 3.29e-07 | 22 |
larynx | 9.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.58e-15 | 106 |
cell type cancer | 2.75e-11 | 143 |