FFCP PHASE1:Hg19::chr5:59064308..59064319,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:59064308..59064319,-
|short_description=p45@PDE4D
|description=CAGE_peak_45_at_PDE4D_5end
|association_with_transcript=125bp_to_uc003jry.2_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_uc003jry.2_5end | |||
|cluster_id=chr5:59064308..59064319,- | |||
|description=CAGE_peak_45_at_PDE4D_5end | |||
|id=chr5:59064308..59064319,- | |||
|ontology_enrichment_celltype=CL:0000066!9.98e-19!254;CL:0002139!2.28e-17!24;CL:0000115!6.16e-16!35;CL:0002078!3.04e-12!44;CL:0000071!1.49e-10!18;CL:0002546!1.49e-10!18;CL:0005020!3.64e-09!6;CL:0002138!3.64e-09!6;CL:0005022!3.64e-09!6;CL:0000213!1.36e-08!57;CL:0000215!1.36e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.85e-27;6!CL:0000115;2.94e-23;36!CL:0002139;7.79e-20;24!CL:0002618;2.04e-14;3!CL:0002078;6.46e-12;45!CL:0000213;2.41e-11;58!CL:0000215;2.41e-11;58!CL:1001319;2.96e-11;1!CL:1000600;2.96e-11;1!CL:0002188;7.25e-09;5!CL:0002543;1.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.28e-27,6;CL:0002138,4.28e-27,6;CL:0005022,4.28e-27,6;CL:0000115,3.86e-26,36;CL:0002078,1.21e-20,45;CL:0002139,1.04e-19,24;CL:0000213,1.04e-15,58;CL:0000215,1.04e-15,58;CL:0002618,2.96e-14,3;CL:0000066,1.31e-11,253;CL:1001319,1.45e-11,1;CL:1000600,1.45e-11,1;CL:0002188,9.57e-09,5;CL:0002543,1.43e-07,6;CL:0000222,8.70e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;3.85e-27;6 | |||
|ontology_enrichment_disease=DOID:305!2.24e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.36e-16!169;UBERON:0000925!1.36e-16!169;UBERON:0006595!1.36e-16!169;UBERON:0001007!4.34e-14!155;UBERON:0001555!4.34e-14!155;UBERON:0007026!4.34e-14!155;UBERON:0000477!4.91e-13!286;UBERON:0004921!7.16e-13!129;UBERON:0004185!7.16e-13!129;UBERON:0001737!4.49e-12!9;UBERON:0000077!5.06e-12!130;UBERON:0001004!1.35e-11!72;UBERON:0001041!5.43e-11!98;UBERON:0001986!1.49e-10!18;UBERON:0004638!1.49e-10!18;UBERON:0004852!1.49e-10!18;UBERON:0000065!2.25e-10!53;UBERON:0000487!1.90e-09!22;UBERON:0001557!3.60e-09!19;UBERON:0006914!4.63e-09!25;UBERON:0008947!6.15e-09!38;UBERON:0003258!6.15e-09!38;UBERON:0000072!8.82e-09!46;UBERON:0004111!1.55e-08!241;UBERON:0003104!7.08e-08!238;UBERON:0009142!7.08e-08!238;UBERON:0002049!5.08e-07!79;UBERON:0007798!5.08e-07!79;UBERON:0000161!9.65e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.94e-20;8!UBERON:0004536;1.94e-20;8!UBERON:0006558;1.94e-20;8!UBERON:0002465;2.07e-16;10!UBERON:0004645;2.96e-11;1!UBERON:0001256;2.96e-11;1!UBERON:0001259;2.96e-11;1!UBERON:0001737;1.74e-10;9!UBERON:0001557;1.74e-10;9!UBERON:0002066;5.17e-09;5!UBERON:0000365;7.25e-09;5!UBERON:0005910;1.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.09e-20,8;UBERON:0004536,2.09e-20,8;UBERON:0006558,2.09e-20,8;UBERON:0002465,2.21e-16,10;UBERON:0004645,1.45e-11,1;UBERON:0001256,1.45e-11,1;UBERON:0001259,1.45e-11,1;UBERON:0001737,1.48e-10,9;UBERON:0000365,4.32e-09,5;UBERON:0002066,6.44e-09,5;UBERON:0000055,1.85e-08,68;UBERON:0005910,1.02e-07,6;UBERON:0002049,2.99e-07,78;UBERON:0007798,2.99e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.825354125820202,0.208994966536811,2.06733407335463,1.06729878806013,4.01664735317604,0.402829317109147,0.760272105718513,0.24406205754817,1.10298924103761,0.81014194788176,2.32179293538607,0.44905874525234,1.0135033243499,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.882351781859152,1.52515610864684,1.18635309555548,0.404493924480493,0.588664395376038,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.462985512576611,1.33177906564219,0,0,0,0,0,0,1.00789276919316,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,1.13733384070897,1.02056223165909,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,3.57315594984836,0.2023155617111,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.86101074534246,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.358042349351218,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0.762760950878299,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0.544692317594951,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.774050650312681,0.438535902517113,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,8.24929121158784,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.906496732161005,0.293104467356165,1.32506888912221,0,0,0.684347351537318,0,0,0.628817220398664,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0,0,0.828864656652147,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0.118920090777569,0,0,0.301925687133347,0.694567422971502,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.645499848534087,0.665320713092027,1.79087190944144,0,0,0.179650404213174,0,0.366724332548599,0,0.665756774185513,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.825354125820202,0.208994966536811,2.06733407335463,1.06729878806013,4.01664735317604,0.402829317109147,0.760272105718513,0.24406205754817,1.10298924103761,0.81014194788176,2.32179293538607,0.44905874525234,1.0135033243499,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.882351781859152,1.52515610864684,1.18635309555548,0.404493924480493,0.588664395376038,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.462985512576611,1.33177906564219,0,0,0,0,0,0,1.00789276919316,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,1.13733384070897,1.02056223165909,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,3.57315594984836,0.2023155617111,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.86101074534246,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.358042349351218,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0.762760950878299,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0.544692317594951,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.774050650312681,0.438535902517113,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,8.24929121158784,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.906496732161005,0.293104467356165,1.32506888912221,0,0,0.684347351537318,0,0,0.628817220398664,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0,0,0.828864656652147,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0.118920090777569,0,0,0.301925687133347,0.694567422971502,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.645499848534087,0.665320713092027,1.79087190944144,0,0,0.179650404213174,0,0.366724332548599,0,0.665756774185513,0.603821380773079,0 | ||
|short_description=p45@PDE4D | |||
}} | }} |
Latest revision as of 07:54, 18 September 2015
Short description: | p45@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_uc003jry.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.28e-27 | 6 |
endothelial cell of lymphatic vessel | 4.28e-27 | 6 |
vascular lymphangioblast | 4.28e-27 | 6 |
endothelial cell | 3.86e-26 | 36 |
meso-epithelial cell | 1.21e-20 | 45 |
endothelial cell of vascular tree | 1.04e-19 | 24 |
lining cell | 1.04e-15 | 58 |
barrier cell | 1.04e-15 | 58 |
endothelial cell of umbilical vein | 2.96e-14 | 3 |
epithelial cell | 1.31e-11 | 253 |
bladder cell | 1.45e-11 | 1 |
lower urinary tract cell | 1.45e-11 | 1 |
glomerular endothelial cell | 9.57e-09 | 5 |
vein endothelial cell | 1.43e-07 | 6 |
mesodermal cell | 8.70e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.09e-20 | 8 |
lymph vasculature | 2.09e-20 | 8 |
lymphatic part of lymphoid system | 2.09e-20 | 8 |
lymphoid system | 2.21e-16 | 10 |
urinary bladder urothelium | 1.45e-11 | 1 |
wall of urinary bladder | 1.45e-11 | 1 |
mucosa of urinary bladder | 1.45e-11 | 1 |
larynx | 1.48e-10 | 9 |
urothelium | 4.32e-09 | 5 |
umbilical vein | 6.44e-09 | 5 |
vessel | 1.85e-08 | 68 |
transitional epithelium | 1.02e-07 | 6 |
vasculature | 2.99e-07 | 78 |
vascular system | 2.99e-07 | 78 |