FFCP PHASE1:Hg19::chr11:59855692..59855720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2206 | |EntrezGene=2206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7316 | |HGNC=7316 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PLJ1 | |UniProt=E9PLJ1 | ||
|association_with_transcript=-13bp_to_ENST00000524868_5end | |association_with_transcript=-13bp_to_ENST00000524868_5end | ||
|cluster_id=chr11:59855692..59855720,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_3_at_MS4A2_5end | |description=CAGE_peak_3_at_MS4A2_5end | ||
Latest revision as of 12:54, 18 September 2015
| Short description: | p3@MS4A2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_MS4A2_5end |
| Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
| Association with transcript: | -13bp_to_ENST00000524868_5end |
| EntrezGene: | MS4A2 |
| HGNC: | 7316 |
| UniProt: | E9PLJ1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@MS4A2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 1.24e-90 | 5 |
| basophil mast progenitor cell | 1.24e-90 | 5 |
| endocrine cell | 1.50e-50 | 9 |
| secretory cell | 8.55e-13 | 36 |
| myeloid leukocyte | 7.56e-09 | 72 |
| basophil | 2.79e-07 | 3 |
| myeloid lineage restricted progenitor cell | 6.88e-07 | 66 |
| granulocyte monocyte progenitor cell | 8.70e-07 | 67 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| surface | 2.71e-19 | 1 |
| blood | 2.34e-11 | 15 |
| haemolymphatic fluid | 2.34e-11 | 15 |
| organism substance | 2.34e-11 | 15 |
| hematopoietic system | 2.99e-11 | 98 |
| blood island | 2.99e-11 | 98 |
| hemolymphoid system | 3.58e-10 | 108 |
Showing 1 to 7 of 7 entries
