FFCP PHASE1:Hg19::chr6:31649209..31649265,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31649209..31649265,-
|short_description=p1@LY6G5C
|description=CAGE_peak_1_at_LY6G5C_5end
|association_with_transcript=0bp_to_ENST00000474395_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80741 | |EntrezGene=80741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13932 | |HGNC=13932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474395_5end | |||
|cluster_id=chr6:31649209..31649265,- | |||
|description=CAGE_peak_1_at_LY6G5C_5end | |||
|id=chr6:31649209..31649265,- | |||
|ontology_enrichment_celltype=CL:0000115!3.52e-12!35;CL:0002139!2.96e-09!24;CL:0002078!1.01e-07!44;CL:0000791!1.92e-07!18;CL:0000789!1.92e-07!18;CL:0002420!1.92e-07!18;CL:0002419!1.92e-07!18;CL:0000790!1.92e-07!18;CL:0000071!4.45e-07!18;CL:0002546!4.45e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.64e-11;36!CL:0002139;1.73e-09;24!CL:0000791;1.85e-07;18!CL:0000789;1.85e-07;18!CL:0002419;1.85e-07;18!CL:0000071;5.05e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.42e-13,36;CL:0002139,8.03e-10,24;CL:0002078,2.03e-08,45;CL:0000791,9.33e-08,18;CL:0000789,9.33e-08,18;CL:0002420,9.33e-08,18;CL:0002419,9.33e-08,18;CL:0000790,9.33e-08,18;CL:0000071,2.33e-07,18;CL:0002546,2.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.85e-07;18!CL:0002546;5.05e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.56e-07!241;UBERON:0001009!1.66e-07!113;UBERON:0004535!2.13e-07!110;UBERON:0000477!2.37e-07!286;UBERON:0000055!3.09e-07!69;UBERON:0001986!4.45e-07!18;UBERON:0004638!4.45e-07!18;UBERON:0004852!4.45e-07!18;UBERON:0000487!5.93e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.70e-07;22!UBERON:0004638;5.05e-07;18!UBERON:0001986;5.05e-07;18!UBERON:0004852;5.05e-07;18!UBERON:0002193;9.26e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.44e-07,22;UBERON:0004638,2.33e-07,18;UBERON:0001986,2.33e-07,18;UBERON:0004852,2.33e-07,18 | |||
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| ||
|short_description=p1@LY6G5C | |||
}} | }} |
Latest revision as of 23:13, 17 September 2015
Short description: | p1@LY6G5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LY6G5C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474395_5end |
EntrezGene: | LY6G5C |
HGNC: | 13932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.42e-13 | 36 |
endothelial cell of vascular tree | 8.03e-10 | 24 |
meso-epithelial cell | 2.03e-08 | 45 |
mature alpha-beta T cell | 9.33e-08 | 18 |
alpha-beta T cell | 9.33e-08 | 18 |
immature T cell | 9.33e-08 | 18 |
mature T cell | 9.33e-08 | 18 |
immature alpha-beta T cell | 9.33e-08 | 18 |
blood vessel endothelial cell | 2.33e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.44e-07 | 22 |
blood vessel endothelium | 2.33e-07 | 18 |
endothelium | 2.33e-07 | 18 |
cardiovascular system endothelium | 2.33e-07 | 18 |