FFCP PHASE1:Hg19::chr6:56483497..56483514,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56483497..56483514,-
|short_description=p84@DST
|description=CAGE_peak_84_at_DST_5end
|association_with_transcript=153bp_to_M22942_5end
|EntrezGene=667
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=667 | |EntrezGene=667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |UniProt=Q03001 | ||
|association_with_transcript=153bp_to_M22942_5end | |||
|cluster_id=chr6:56483497..56483514,- | |||
|description=CAGE_peak_84_at_DST_5end | |||
|id=chr6:56483497..56483514,- | |||
|ontology_enrichment_celltype=CL:0002076!1.40e-13!43;CL:0000223!7.70e-13!59;CL:0002251!5.72e-12!21;CL:0000066!4.43e-08!254;CL:0002623!4.65e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.40e-46;3!CL:0000622;2.76e-28;5!CL:0002251;2.65e-27;20!CL:0000154;1.06e-23;6!CL:0002076;6.13e-19;42!CL:0002336;1.31e-16;1!CL:0002261;1.31e-16;1!CL:0002170;1.31e-16;1!CL:0000150;4.89e-16;9!CL:0000182;4.42e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.92e-46,3;CL:0000223,9.90e-31,58;CL:0000622,3.34e-28,5;CL:0002251,4.31e-27,20;CL:0000154,1.24e-23,6;CL:0002076,1.44e-22,42;CL:0002336,1.41e-16,1;CL:0002261,1.41e-16,1;CL:0002170,1.41e-16,1;CL:0000150,5.43e-16,9;CL:0000182,4.19e-12,12;CL:0002321,1.30e-07,250;CL:0000066,1.41e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;1.38e-18;58 | |||
|ontology_enrichment_disease=DOID:1749!1.45e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!7.09e-09!5;UBERON:0000166!2.87e-08!21;UBERON:0004121!2.03e-07!169;UBERON:0000033!2.12e-07!123;UBERON:0000153!3.45e-07!129;UBERON:0007811!3.45e-07!129;UBERON:0003343!4.20e-07!4;UBERON:0004785!4.20e-07!4;UBERON:0000924!5.13e-07!173;UBERON:0006601!5.13e-07!173;UBERON:0000161!7.00e-07!35;UBERON:0000165!8.12e-07!28;UBERON:0000930!8.12e-07!28;UBERON:0001004!8.24e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.06e-23;6!UBERON:0003293;1.06e-23;6!UBERON:0003294;1.06e-23;6!UBERON:0010047;1.06e-23;6!UBERON:0003408;1.06e-23;6!UBERON:0000167;1.06e-23;6!UBERON:0000161;3.33e-20;19!UBERON:0000166;3.33e-20;19!UBERON:0000165;1.79e-19;28!UBERON:0002365;3.64e-18;31!UBERON:0002330;3.64e-18;31!UBERON:0003729;3.38e-11;13!UBERON:0001041;1.56e-10;14!UBERON:0002530;1.11e-08;57!UBERON:0001007;2.44e-08;81!UBERON:0002107;7.72e-08;19!UBERON:0006925;7.72e-08;19!UBERON:0007811;1.17e-07;52!UBERON:0000344;1.79e-07;20!UBERON:0000033;2.57e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.24e-23,6;UBERON:0003293,1.24e-23,6;UBERON:0003294,1.24e-23,6;UBERON:0010047,1.24e-23,6;UBERON:0000167,1.24e-23,6;UBERON:0000165,1.18e-18,29;UBERON:0000930,1.18e-18,29;UBERON:0002365,1.44e-17,31;UBERON:0002330,1.44e-17,31;UBERON:0000166,2.59e-17,22;UBERON:0000161,5.25e-15,36;UBERON:0003408,1.85e-14,10;UBERON:0000033,6.46e-13,56;UBERON:0002530,2.77e-12,59;UBERON:0000153,1.27e-11,62;UBERON:0007811,1.27e-11,62;UBERON:0003729,4.54e-11,13;UBERON:0001444,5.82e-11,49;UBERON:0004119,1.93e-10,160;UBERON:0000925,1.93e-10,160;UBERON:0006595,1.93e-10,160;UBERON:0001007,1.66e-09,145;UBERON:0001555,1.66e-09,145;UBERON:0007026,1.66e-09,145;UBERON:0003102,3.14e-09,99;UBERON:0002107,7.45e-08,19;UBERON:0006925,7.45e-08,19;UBERON:0008836,7.45e-08,19;UBERON:0000344,2.17e-07,20;UBERON:0001004,3.51e-07,74;UBERON:0003929,4.61e-07,54;UBERON:0008835,7.47e-07,22;UBERON:0003894,7.47e-07,22 | |||
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| ||
|short_description=p84@DST | |||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p84@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_84_at_DST_5end |
Coexpression cluster: | NA |
Association with transcript: | 153bp_to_M22942_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.92e-46 | 3 |
endodermal cell | 9.90e-31 | 58 |
acinar cell | 3.34e-28 | 5 |
epithelial cell of alimentary canal | 4.31e-27 | 20 |
protein secreting cell | 1.24e-23 | 6 |
endo-epithelial cell | 1.44e-22 | 42 |
buccal mucosa cell | 1.41e-16 | 1 |
endothelial cell of viscerocranial mucosa | 1.41e-16 | 1 |
keratinized cell of the oral mucosa | 1.41e-16 | 1 |
glandular epithelial cell | 5.43e-16 | 9 |
hepatocyte | 4.19e-12 | 12 |
embryonic cell | 1.30e-07 | 250 |
epithelial cell | 1.41e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.24e-23 | 6 |
gland of oral region | 1.24e-23 | 6 |
gland of foregut | 1.24e-23 | 6 |
oral gland | 1.24e-23 | 6 |
oral cavity | 1.24e-23 | 6 |
mouth | 1.18e-18 | 29 |
stomodeum | 1.18e-18 | 29 |
exocrine gland | 1.44e-17 | 31 |
exocrine system | 1.44e-17 | 31 |
oral opening | 2.59e-17 | 22 |
orifice | 5.25e-15 | 36 |
gland of gut | 1.85e-14 | 10 |
head | 6.46e-13 | 56 |
gland | 2.77e-12 | 59 |
anterior region of body | 1.27e-11 | 62 |
craniocervical region | 1.27e-11 | 62 |
mouth mucosa | 4.54e-11 | 13 |
subdivision of head | 5.82e-11 | 49 |
endoderm-derived structure | 1.93e-10 | 160 |
endoderm | 1.93e-10 | 160 |
presumptive endoderm | 1.93e-10 | 160 |
digestive system | 1.66e-09 | 145 |
digestive tract | 1.66e-09 | 145 |
primitive gut | 1.66e-09 | 145 |
surface structure | 3.14e-09 | 99 |
liver | 7.45e-08 | 19 |
digestive gland | 7.45e-08 | 19 |
liver bud | 7.45e-08 | 19 |
mucosa | 2.17e-07 | 20 |
respiratory system | 3.51e-07 | 74 |
gut epithelium | 4.61e-07 | 54 |
hepatic diverticulum | 7.47e-07 | 22 |
liver primordium | 7.47e-07 | 22 |