FFCP PHASE1:Hg19::chr7:150163903..150163926,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:150163903..150163926,+
|short_description=p6@GIMAP8
|description=CAGE_peak_6_at_GIMAP8_5end
|association_with_transcript=-101bp_to_AK098320_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=155038 | |EntrezGene=155038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21792 | |HGNC=21792 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-101bp_to_AK098320_5end | |||
|cluster_id=chr7:150163903..150163926,+ | |||
|description=CAGE_peak_6_at_GIMAP8_5end | |||
|id=chr7:150163903..150163926,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.76e-20!24;CL:0000115!9.86e-17!35;CL:0000071!4.98e-12!18;CL:0002546!4.98e-12!18;CL:0002078!7.88e-12!44;CL:0005020!1.58e-10!6;CL:0002138!1.58e-10!6;CL:0005022!1.58e-10!6;CL:0000213!1.24e-07!57;CL:0000215!1.24e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.64e-28;24!CL:0000115;8.63e-21;36!CL:0002138;8.97e-19;6!CL:0000071;1.80e-14;18!CL:0002078;1.99e-12;45!CL:0002144;4.15e-10;3!CL:0002618;8.09e-10;3!CL:0000213;1.26e-08;58!CL:0000215;1.26e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.26e-28,24;CL:0000115,1.68e-25,36;CL:0002078,2.39e-19,45;CL:0005020,9.02e-19,6;CL:0002138,9.02e-19,6;CL:0005022,9.02e-19,6;CL:0000071,1.45e-14,18;CL:0002546,1.45e-14,18;CL:0000213,7.20e-14,58;CL:0000215,7.20e-14,58;CL:0002144,4.03e-10,3;CL:0002618,6.89e-10,3 | |||
|ontology_enrichment_development_v019=CL:0005022;8.97e-19;6!CL:0002546;1.80e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.42e-57!115;UBERON:0004111!2.75e-15!241;UBERON:0000477!2.98e-13!286;UBERON:0001049!3.49e-12!57;UBERON:0005068!3.49e-12!57;UBERON:0006241!3.49e-12!57;UBERON:0007135!3.49e-12!57;UBERON:0001986!4.98e-12!18;UBERON:0004638!4.98e-12!18;UBERON:0004852!4.98e-12!18;UBERON:0003080!1.01e-10!42;UBERON:0000025!1.18e-10!194;UBERON:0002780!6.87e-10!41;UBERON:0001890!6.87e-10!41;UBERON:0006240!6.87e-10!41;UBERON:0000467!6.90e-10!625;UBERON:0000480!8.15e-10!626;UBERON:0002465!9.77e-10!10;UBERON:0000468!1.14e-09!659;UBERON:0002616!1.16e-09!59;UBERON:0000487!3.76e-09!22;UBERON:0003075!5.04e-09!86;UBERON:0007284!5.04e-09!86;UBERON:0002346!3.07e-08!90;UBERON:0002020!3.87e-08!34;UBERON:0003528!3.87e-08!34;UBERON:0001017!3.99e-08!82;UBERON:0005743!4.29e-08!86;UBERON:0001893!4.96e-08!34;UBERON:0000483!5.50e-08!309;UBERON:0000955!8.29e-08!69;UBERON:0006238!8.29e-08!69;UBERON:0000119!9.87e-08!312;UBERON:0006914!1.28e-07!25;UBERON:0001473!1.44e-07!8;UBERON:0004536!1.44e-07!8;UBERON:0006558!1.44e-07!8;UBERON:0002791!1.71e-07!33;UBERON:0000073!2.75e-07!94;UBERON:0001016!2.75e-07!94;UBERON:0002298!8.27e-07!8;UBERON:0001869!8.81e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.80e-14;18!UBERON:0001986;1.80e-14;18!UBERON:0004852;1.80e-14;18!UBERON:0002465;2.47e-14;10!UBERON:0001473;7.19e-14;8!UBERON:0004536;7.19e-14;8!UBERON:0006558;7.19e-14;8!UBERON:0000487;1.90e-11;22!UBERON:0010523;4.15e-10;3!UBERON:0001915;4.15e-10;3!UBERON:0001982;4.15e-10;3!UBERON:0006914;8.07e-10;25!UBERON:0000055;2.19e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.06e-24,114;UBERON:0004638,1.45e-14,18;UBERON:0001986,1.45e-14,18;UBERON:0004852,1.45e-14,18;UBERON:0002465,1.95e-14,10;UBERON:0001473,7.22e-14,8;UBERON:0004536,7.22e-14,8;UBERON:0006558,7.22e-14,8;UBERON:0000487,1.60e-11,22;UBERON:0010523,4.03e-10,3;UBERON:0001915,4.03e-10,3;UBERON:0001982,4.03e-10,3;UBERON:0006914,6.97e-10,25;UBERON:0000055,8.55e-10,68;UBERON:0002049,5.57e-08,78;UBERON:0007798,5.57e-08,78;UBERON:0001009,3.35e-07,112 | |||
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| ||
|short_description=p6@GIMAP8 | |||
}} | }} |
Latest revision as of 03:19, 17 September 2015
Short description: | p6@GIMAP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GIMAP8_5end |
Coexpression cluster: | NA |
Association with transcript: | -101bp_to_AK098320_5end |
EntrezGene: | GIMAP8 |
HGNC: | 21792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.26e-28 | 24 |
endothelial cell | 1.68e-25 | 36 |
meso-epithelial cell | 2.39e-19 | 45 |
lymphangioblast | 9.02e-19 | 6 |
endothelial cell of lymphatic vessel | 9.02e-19 | 6 |
vascular lymphangioblast | 9.02e-19 | 6 |
blood vessel endothelial cell | 1.45e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.45e-14 | 18 |
lining cell | 7.20e-14 | 58 |
barrier cell | 7.20e-14 | 58 |
capillary endothelial cell | 4.03e-10 | 3 |
endothelial cell of umbilical vein | 6.89e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.06e-24 | 114 |
blood vessel endothelium | 1.45e-14 | 18 |
endothelium | 1.45e-14 | 18 |
cardiovascular system endothelium | 1.45e-14 | 18 |
lymphoid system | 1.95e-14 | 10 |
lymphatic vessel | 7.22e-14 | 8 |
lymph vasculature | 7.22e-14 | 8 |
lymphatic part of lymphoid system | 7.22e-14 | 8 |
simple squamous epithelium | 1.60e-11 | 22 |
microcirculatory vessel | 4.03e-10 | 3 |
endothelium of capillary | 4.03e-10 | 3 |
capillary | 4.03e-10 | 3 |
squamous epithelium | 6.97e-10 | 25 |
vessel | 8.55e-10 | 68 |
vasculature | 5.57e-08 | 78 |
vascular system | 5.57e-08 | 78 |
circulatory system | 3.35e-07 | 112 |