FFCP PHASE1:Hg19::chr7:20686946..20686958,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:20686946..20686958,+
|short_description=p1@ABCB5
|description=CAGE_peak_1_at_ABCB5_5end
|association_with_transcript=0bp_to_ENST00000477094_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=340273 | |EntrezGene=340273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=46 | |HGNC=46 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477094_5end | |||
|cluster_id=chr7:20686946..20686958,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_ABCB5_5end | |||
|id=chr7:20686946..20686958,+ | |||
|ontology_enrichment_celltype=CL:0000147!5.14e-17!14;CL:0000148!6.51e-13!10;CL:0000541!6.51e-13!10;CL:0002567!4.10e-09!3;CL:0002619!2.23e-08!3;CL:0000325!5.12e-08!39;CL:0000710!2.75e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.27e-40;10!CL:0000147;2.50e-28;14!CL:0002567;1.57e-25;3!CL:0000710;1.31e-19;20!CL:0000075;2.52e-14;27!CL:0000235;2.11e-12;6!CL:0002077;5.10e-10;34!CL:0002566;1.03e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.27e-40,10;CL:0000541,6.27e-40,10;CL:0000147,2.51e-28,14;CL:0002567,1.57e-25,3;CL:0000710,1.31e-19,20;CL:0000075,2.52e-14,27;CL:0000235,1.87e-12,6;CL:0002077,3.28e-11,34;CL:0002566,1.03e-09,1;CL:0000333,1.08e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.25e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.25e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@ABCB5 | |||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p1@ABCB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCB5_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000477094_5end |
EntrezGene: | ABCB5 |
HGNC: | 46 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.27e-40 | 10 |
melanoblast | 6.27e-40 | 10 |
pigment cell | 2.51e-28 | 14 |
light melanocyte | 1.57e-25 | 3 |
neurecto-epithelial cell | 1.31e-19 | 20 |
columnar/cuboidal epithelial cell | 2.52e-14 | 27 |
macrophage | 1.87e-12 | 6 |
ecto-epithelial cell | 3.28e-11 | 34 |
dark melanocyte | 1.03e-09 | 1 |
migratory neural crest cell | 1.08e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.25e-17 | 2 |