FFCP PHASE1:Hg19::chr7:37946828..37946847,-: Difference between revisions
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|id=chr7:37946828..37946847,-
|short_description=p@chr7:37946828..37946847,-
|description=CAGE_peak_at_chr7:37946828..37946847,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:37946828..37946847,- | |||
|coexpression_cluster_id=C1538 | |||
|description=CAGE_peak_at_chr7:37946828..37946847,- | |||
|id=chr7:37946828..37946847,- | |||
|ontology_enrichment_celltype=CL:1000306!1.76e-11!4;CL:0002547!1.76e-11!4;CL:0002579!1.23e-09!3;CL:0000135!2.45e-09!3;CL:0000386!2.45e-09!3;CL:0002615!2.45e-09!3;CL:0000388!2.45e-09!3;CL:0002334!3.63e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.63e-24;3!CL:0000135;7.01e-24;3!CL:0000388;7.01e-24;3!CL:0002334;6.97e-23;12!CL:0000214;1.21e-11;3!CL:0002615;2.57e-11;3!CL:0002580;2.78e-11;3!CL:0002616;1.96e-09;1!CL:0002174;6.21e-09;1!CL:0002581;6.21e-09;1!CL:0000501;6.21e-09;1!CL:1000306;1.57e-08;4!CL:0002547;1.57e-08;4!CL:0000499;7.57e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.78e-24,3;CL:0000135,1.26e-23,3;CL:0000388,1.26e-23,3;CL:0002334,6.48e-23,12;CL:0000214,1.21e-11,3;CL:0002615,1.74e-11,3;CL:0002580,3.79e-11,3;CL:0000057,1.89e-10,76;CL:0002616,1.89e-09,1;CL:0002581,4.91e-09,1;CL:0002174,6.72e-09,1;CL:0000501,6.72e-09,1;CL:1000306,9.56e-09,4;CL:0002547,9.56e-09,4;CL:0000499,8.34e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.87e-17!6;UBERON:0002358!2.87e-17!6;UBERON:0003684!2.87e-17!6;UBERON:0001178!2.87e-17!6;UBERON:0004457!1.75e-14!12;UBERON:0000042!1.75e-14!12;UBERON:0000415!1.76e-11!4;UBERON:0007240!1.76e-11!4;UBERON:0005742!1.76e-11!4;UBERON:0005734!1.76e-11!4;UBERON:0004664!1.76e-11!4;UBERON:0004663!1.76e-11!4;UBERON:0000043!2.45e-09!3;UBERON:0004923!2.65e-07!57;UBERON:0005406!6.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.09e-42;9!UBERON:0000042;5.09e-42;9!UBERON:0003688;1.71e-32;6!UBERON:0002358;1.71e-32;6!UBERON:0003684;1.71e-32;6!UBERON:0001178;1.71e-32;6!UBERON:0007846;7.01e-24;3!UBERON:0000043;7.01e-24;3!UBERON:0007845;7.01e-24;3!UBERON:0005406;1.22e-16;2!UBERON:0006915;1.21e-11;3!UBERON:0007616;1.21e-11;3!UBERON:0002217;1.21e-11;3!UBERON:0002018;1.21e-11;3!UBERON:0005795;2.30e-09;1!UBERON:0004797;1.57e-08;4!UBERON:0000415;1.57e-08;4!UBERON:0007240;1.57e-08;4!UBERON:0005742;1.57e-08;4!UBERON:0005734;1.57e-08;4!UBERON:0004664;1.57e-08;4!UBERON:0004663;1.57e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.60e-33,6;UBERON:0002358,7.60e-33,6;UBERON:0003684,7.60e-33,6;UBERON:0001178,7.60e-33,6;UBERON:0004457,1.36e-31,12;UBERON:0000042,1.36e-31,12;UBERON:0007846,1.26e-23,3;UBERON:0000043,1.26e-23,3;UBERON:0007845,1.26e-23,3;UBERON:0005406,9.26e-17,2;UBERON:0006915,1.21e-11,3;UBERON:0007616,1.21e-11,3;UBERON:0002217,1.21e-11,3;UBERON:0002018,1.21e-11,3;UBERON:0000415,9.56e-09,4;UBERON:0007240,9.56e-09,4;UBERON:0005742,9.56e-09,4;UBERON:0005734,9.56e-09,4;UBERON:0004664,9.56e-09,4;UBERON:0004663,9.56e-09,4;UBERON:0004923,2.55e-08,66;UBERON:0004458,3.90e-07,49 | |||
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|phase1_expression=0.726713517082227,0.856402095563933,1.83240725324762,3.00219895059391,0.893922188854576,6.97870819280295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.794455084879313,1.72101972449288,1.77334191099179,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.3996218765488,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72918588600655,0,1.12264037773229,4.61300937320523,1.53512174720011,8.5252578206112,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79993743535795,6.25660296623814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,1.15425387755696,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,1.14241563650639,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,1.2679671827502,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,8.31916131536553,1.29787968637137,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0.606351566874658,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.488965776731466,4.47585796147312,0,0.603821380773079,0 | ||
|short_description=p@chr7:37946828..37946847,- | |||
}} | }} |
Latest revision as of 09:49, 31 July 2015
Short description: | p@chr7:37946828..37946847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:37946828..37946847, - |
Coexpression cluster: | C1538_Adipocyte_Synoviocyte_Preadipocyte_tenocyte_cervix_Fibroblast_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.78e-24 | 3 |
fibrocyte | 1.26e-23 | 3 |
tendon cell | 1.26e-23 | 3 |
preadipocyte | 6.48e-23 | 12 |
synovial cell | 1.21e-11 | 3 |
adipocyte of omentum tissue | 1.74e-11 | 3 |
preadipocyte of the breast | 3.79e-11 | 3 |
fibroblast | 1.89e-10 | 76 |
perirenal adipocyte cell | 1.89e-09 | 1 |
perirenal preadipocyte | 4.91e-09 | 1 |
follicular cell of ovary | 6.72e-09 | 1 |
granulosa cell | 6.72e-09 | 1 |
fibroblast of tunica adventitia of artery | 9.56e-09 | 4 |
fibroblast of the aortic adventitia | 9.56e-09 | 4 |
stromal cell | 8.34e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.60e-33 | 6 |
peritoneum | 7.60e-33 | 6 |
abdominal cavity | 7.60e-33 | 6 |
visceral peritoneum | 7.60e-33 | 6 |
cavity lining | 1.36e-31 | 12 |
serous membrane | 1.36e-31 | 12 |
dense regular connective tissue | 1.26e-23 | 3 |
tendon | 1.26e-23 | 3 |
regular connective tissue | 1.26e-23 | 3 |
perirenal fat | 9.26e-17 | 2 |
stratified squamous epithelium | 1.21e-11 | 3 |
layer of synovial tissue | 1.21e-11 | 3 |
synovial joint | 1.21e-11 | 3 |
synovial membrane of synovial joint | 1.21e-11 | 3 |
artery wall | 9.56e-09 | 4 |
tunica adventitia of artery | 9.56e-09 | 4 |
adventitia | 9.56e-09 | 4 |
tunica adventitia of blood vessel | 9.56e-09 | 4 |
aorta tunica adventitia | 9.56e-09 | 4 |
aorta wall | 9.56e-09 | 4 |
organ component layer | 2.55e-08 | 66 |
body cavity or lining | 3.90e-07 | 49 |