FFCP PHASE1:Hg19::chr7:47493322..47493332,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:47493322..47493332,-
|short_description=p37@TNS3
|description=CAGE_peak_37_at_TNS3_5end
|association_with_transcript=-493bp_to_ENST00000413551_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64759 | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |HGNC=21616 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWN9 | |UniProt=C9JWN9 | ||
|association_with_transcript=-493bp_to_ENST00000413551_5end | |||
|cluster_id=chr7:47493322..47493332,- | |||
|description=CAGE_peak_37_at_TNS3_5end | |||
|id=chr7:47493322..47493332,- | |||
|ontology_enrichment_celltype=CL:0002619!5.81e-11!3;CL:0002554!7.88e-08!2;CL:0002194!1.01e-07!63;CL:0000576!1.01e-07!63;CL:0000040!1.01e-07!63;CL:0000559!1.01e-07!63;CL:0002009!2.19e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.07e-13;2!CL:1000398;1.07e-13;2!CL:0002541;1.41e-09;3!CL:0002619;1.41e-09;3!CL:0000307;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,8.28e-14,2;CL:1000398,8.28e-14,2;CL:0002619,1.30e-09,3;CL:0000068,1.67e-09,3;CL:0000069,1.67e-09,3;CL:0000307,1.67e-09,3;CL:0000377,1.67e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.15e-26;1!CL:0000377;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.82e-10!115;UBERON:0002193!4.59e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.07e-13;2!UBERON:0003497;1.07e-13;2!UBERON:0003909;1.07e-13;2!UBERON:0003835;1.07e-13;2!UBERON:0003124;1.41e-09;3!UBERON:0000920;1.41e-09;3!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3!UBERON:0001987;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.79e-15,7;UBERON:0001281,8.28e-14,2;UBERON:0003497,8.28e-14,2;UBERON:0003909,8.28e-14,2;UBERON:0003835,8.28e-14,2;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0000920,1.81e-09,3;UBERON:0005631,4.66e-08,14;UBERON:0000158,4.66e-08,14;UBERON:0001987,1.31e-07,4;UBERON:0004340,1.31e-07,4 | |||
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|short_description=p37@TNS3 | |||
}} | }} |
Latest revision as of 20:50, 18 September 2015
Short description: | p37@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_TNS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -493bp_to_ENST00000413551_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | C9JWN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 8.28e-14 | 2 |
endothelial cell of hepatic sinusoid | 8.28e-14 | 2 |
adult endothelial progenitor cell | 1.30e-09 | 3 |
duct epithelial cell | 1.67e-09 | 3 |
branched duct epithelial cell | 1.67e-09 | 3 |
tracheal epithelial cell | 1.67e-09 | 3 |
tracheoblast | 1.67e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.79e-15 | 7 |
hepatic sinusoid | 8.28e-14 | 2 |
abdomen blood vessel | 8.28e-14 | 2 |
sinusoid | 8.28e-14 | 2 |
abdominal segment blood vessel | 8.28e-14 | 2 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
extraembryonic membrane | 4.66e-08 | 14 |
membranous layer | 4.66e-08 | 14 |
placenta | 1.31e-07 | 4 |
allantois | 1.31e-07 | 4 |