FFCP PHASE1:Hg19::chr7:80373842..80373859,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:80373842..80373859,-
|short_description=p8@SEMA3C
|description=CAGE_peak_8_at_SEMA3C_5end
|association_with_transcript=-322bp_to_D32000_5end
|EntrezGene=1...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-322bp_to_D32000_5end | |||
|cluster_id=chr7:80373842..80373859,- | |||
|coexpression_cluster_id=C1283 | |||
|description=CAGE_peak_8_at_SEMA3C_5end | |||
|id=chr7:80373842..80373859,- | |||
|ontology_enrichment_celltype=CL:0000077!1.07e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000214;5.37e-09;3!CL:0000135;5.59e-09;3!CL:0000388;5.59e-09;3!CL:0002579;1.43e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,5.29e-09,3;CL:0000135,5.72e-09,3;CL:0000388,5.72e-09,3;CL:0002579,2.08e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.47e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.09e-09;14!DOID:6193;2.98e-07;1!DOID:3369;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-09,14;DOID:6193,3.36e-07,1;DOID:3369,5.06e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.97e-16;9!UBERON:0000042;5.97e-16;9!UBERON:0002118;1.60e-10;5!UBERON:0003688;4.89e-09;6!UBERON:0002358;4.89e-09;6!UBERON:0003684;4.89e-09;6!UBERON:0001178;4.89e-09;6!UBERON:0006915;5.37e-09;3!UBERON:0007616;5.37e-09;3!UBERON:0002217;5.37e-09;3!UBERON:0002018;5.37e-09;3!UBERON:0007846;5.59e-09;3!UBERON:0000043;5.59e-09;3!UBERON:0007845;5.59e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.12e-11,12;UBERON:0000042,1.12e-11,12;UBERON:0002118,1.51e-10,5;UBERON:0006915,5.29e-09,3;UBERON:0007616,5.29e-09,3;UBERON:0002217,5.29e-09,3;UBERON:0002018,5.29e-09,3;UBERON:0007846,5.72e-09,3;UBERON:0000043,5.72e-09,3;UBERON:0007845,5.72e-09,3;UBERON:0003688,9.20e-09,6;UBERON:0002358,9.20e-09,6;UBERON:0003684,9.20e-09,6;UBERON:0001178,9.20e-09,6 | |||
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| ||
|short_description=p8@SEMA3C | |||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p8@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SEMA3C_5end |
Coexpression cluster: | C1283_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Ewing_Chondrocyte_Neurons |
Association with transcript: | -322bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 5.29e-09 | 3 |
fibrocyte | 5.72e-09 | 3 |
tendon cell | 5.72e-09 | 3 |
omentum preadipocyte | 2.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.12e-11 | 12 |
serous membrane | 1.12e-11 | 12 |
right ovary | 1.51e-10 | 5 |
stratified squamous epithelium | 5.29e-09 | 3 |
layer of synovial tissue | 5.29e-09 | 3 |
synovial joint | 5.29e-09 | 3 |
synovial membrane of synovial joint | 5.29e-09 | 3 |
dense regular connective tissue | 5.72e-09 | 3 |
tendon | 5.72e-09 | 3 |
regular connective tissue | 5.72e-09 | 3 |
omentum | 9.20e-09 | 6 |
peritoneum | 9.20e-09 | 6 |
abdominal cavity | 9.20e-09 | 6 |
visceral peritoneum | 9.20e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.30e-09 | 14 |
epithelioid sarcoma | 3.36e-07 | 1 |
peripheral primitive neuroectodermal tumor | 5.06e-07 | 1 |