FFCP PHASE1:Hg19::chr7:87104963..87105038,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:87104963..87105038,-
|short_description=p1@ABCB4
|description=CAGE_peak_1_at_ABCB4_5end
|association_with_transcript=0bp_to_ENST00000358400,ENST00000359206...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5244 | |EntrezGene=5244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=45 | |HGNC=45 | ||
|TSSclassifier=strong | |||
|UniProt=A4D1D5,P21439 | |UniProt=A4D1D5,P21439 | ||
|association_with_transcript=0bp_to_ENST00000358400,ENST00000359206,NM_000443,NM_018849,NM_018850,uc003uiv.1,uc003uiw.1,uc003uix.1_5end | |||
|cluster_id=chr7:87104963..87105038,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ABCB4_5end | |||
|id=chr7:87104963..87105038,- | |||
|ontology_enrichment_celltype=CL:0000839!8.52e-11!70;CL:0002194!1.71e-10!63;CL:0000576!1.71e-10!63;CL:0000040!1.71e-10!63;CL:0000559!1.71e-10!63;CL:0000236!8.47e-10!14;CL:0002009!1.31e-09!65;CL:0002057!1.33e-09!42;CL:0000557!6.00e-09!71;CL:0000766!1.25e-08!76;CL:0002087!2.02e-08!119;CL:0000860!4.76e-08!45;CL:0000945!4.97e-08!24;CL:0000826!4.97e-08!24;CL:0002031!1.78e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.89e-14;13!CL:0000945;1.44e-11;24!CL:0000473;3.53e-08;39!CL:0000234;3.53e-08;39!CL:0000860;3.04e-07;33!CL:0002057;3.04e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.44e-13,115;CL:0000236,7.65e-13,14;CL:0002031,2.92e-12,120;CL:0000839,4.11e-12,66;CL:0002194,5.84e-12,59;CL:0000576,5.84e-12,59;CL:0000040,5.84e-12,59;CL:0000559,5.84e-12,59;CL:0000945,8.58e-12,24;CL:0000826,8.58e-12,24;CL:0002009,3.03e-11,61;CL:0000473,1.62e-10,48;CL:0000234,1.62e-10,48;CL:0000557,3.08e-10,67;CL:0000738,3.32e-09,136;CL:0000766,7.36e-09,72;CL:0000860,5.74e-08,42;CL:0002057,5.74e-08,42;CL:0002032,8.61e-08,161;CL:0000837,8.61e-08,161;CL:0000037,2.73e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-18!115;UBERON:0002405!4.71e-09!115;UBERON:0002390!1.96e-08!102;UBERON:0003061!1.96e-08!102;UBERON:0002193!2.02e-08!112;UBERON:0001474!3.51e-07!86;UBERON:0002371!4.98e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-09,98;UBERON:0003061,2.09e-09,98;UBERON:0002193,2.18e-09,108;UBERON:0002371,6.61e-08,76;UBERON:0002405,7.69e-08,93;UBERON:0001474,8.43e-08,82;UBERON:0007023,1.51e-07,114;UBERON:0004765,9.94e-07,90 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,1.02000345622126,0,1.71741592278634,0.547497700291537,0.502170558379211,2.44522898393444,2.21671591514854,1.96776953284198,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0.154934401160603,0,0.587200878669695,1.66198622559563,2.20598892217156,1.73608696572681,0,0.32389366601898,0.515151135268373,0.145398238779565,0.377875943688809,0,1.85943229524548,2.46700732813095,2.16794459626573,6.04154023876516,3.84241059793651,5.43909128743746,4.48169384957604,2.5819387343353,4.06279459783025,0.564727018627814,1.63743690034707,1.57306439111559,1.22433556948361,3.20929027076094,0.639337125799041,0.989553900560148,1.99463657621632,1.27867425159808,0.290209238628584,0.56738522469114,1.86846674698672,3.76872997885115,5.73631210262222,5.86409880703815,0,1.47311054395026,0.949387162322653,0.633765858935825,1.4882300997553,0.838634582033504,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0.365328307529268,21.1195493353587,22.3916830617474,24.016749854316,19.6295902380593,17.6174234295845,23.5648500381338,19.170301310761,16.2189138271012,29.0298614245819,15.2681669236444,17.2022952656353,0,1.68152568894461,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0.973269740605272,5.48301939551594,3.76939975686359,3.77689578480442,0.72038491523742,0,0,5.8418530857843,7.31344896656922,6.1160661838678,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.516833518338658,2.84613010149368,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0.647491777472526,0.561803226808994,0.408308342509787,0.859840221182376,1.13658359293342,0,0.247266929278557,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0,1.61450672119976,1.2813443329114,0.847727604638247,0.900273288253207,0.206105058476878,1.03056216018252,0.744467425326359,0.168776332241266,0,0.504867548488229,0.552299391853796,0.80823028409406,1.42003837006646,0.403008392910561,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,1.14027160516907,0.504641701751257,0.36497735907583,4.69348596989448,6.43240938192885,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,172.38684735769,126.784710951414,232.771223232473,0,0.614942192715568,0.686271241194102,0,0,0,0,0,0,5.77325368101093,10.4337364477569,1.52631302506568,0.144366447761074,0,0,0,0,1.72351904261178,6.78612368903789,3.71577905721821,0,0,0,0,0,0,3.94130590316755,0,0.621984346622316,0.288239906833923,0,2.28592419451809,9.93169906451522,17.582617081507,10.2643467613623,1.7480673759565,0,3.71574362419752,0.336393253036082,0,0,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0,0,0,0,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,2.28685161800217,1.30139853857622,0,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,1.00034104211935,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0.781952530212746,0,0,1.6541442089831,0.647142602455851,0.74709290462411,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0,0.966875596732978,0.200506470303285,0.0920809889358963,0,0.728364672026868,1.04899531967539,1.80479845162965,2.46449078734127,1.56869953835371,0,6.01644284689391,0,0,1.29549549661284,0,0.812839312631559,1.50506932156456,0,0,0.671624264166535,1.09629938322967,2.3529190592241,0.256450125116389,0.328014645699706,0.325378394664303,38.5373383562481,1.28197250745681,2.31026599777646,0,0,0,1.45006077438183,0,0.15350367472613,0,0.751941714077915,0.145016693914229,0.170453254832202,0.623224249527161,0,0,0,0,0,0,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0.744316738719335,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,2.10629228119491,0,0,0,0.409499734223957,0,1.13008116620243,1.10273068709225,0,0,0,0,0.811641507850816,0,0,0,0,1.07001315444375,0,0.633322905892992,0.658589785919804,0,0.349934720244983,0,0,0,35.398069092069,0,0,0,0,0.507447609232169,0,1.13929437434833,1.42939065274673,2.05681136543097,1.94541993357815,1.08006287447623,2.37937552888281,0,0,0,5.75989842889728,3.89526875036401,0.142283686696828,0,0,0,0,1.62310970137278,0,0,0,0,0,0,0.201799707191048,3.40676990152261,0,4.30137070031841,1.56573275524691,1.50164227540718,0.19538809540204,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.703347082052564,1.8922479853894,0,0,4.78195171802567,8.84108529699673,0.251932747854276,14.2153468677995,3.20020494198781,12.1305439188105,0,0,2.55786185113436,1.28236427328014,2.3948309234694,0,7.75466196876175,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0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| |phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,1.02000345622126,0,1.71741592278634,0.547497700291537,0.502170558379211,2.44522898393444,2.21671591514854,1.96776953284198,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0.154934401160603,0,0.587200878669695,1.66198622559563,2.20598892217156,1.73608696572681,0,0.32389366601898,0.515151135268373,0.145398238779565,0.377875943688809,0,1.85943229524548,2.46700732813095,2.16794459626573,6.04154023876516,3.84241059793651,5.43909128743746,4.48169384957604,2.5819387343353,4.06279459783025,0.564727018627814,1.63743690034707,1.57306439111559,1.22433556948361,3.20929027076094,0.639337125799041,0.989553900560148,1.99463657621632,1.27867425159808,0.290209238628584,0.56738522469114,1.86846674698672,3.76872997885115,5.73631210262222,5.86409880703815,0,1.47311054395026,0.949387162322653,0.633765858935825,1.4882300997553,0.838634582033504,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0.365328307529268,21.1195493353587,22.3916830617474,24.016749854316,19.6295902380593,17.6174234295845,23.5648500381338,19.170301310761,16.2189138271012,29.0298614245819,15.2681669236444,17.2022952656353,0,1.68152568894461,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0.973269740605272,5.48301939551594,3.76939975686359,3.77689578480442,0.72038491523742,0,0,5.8418530857843,7.31344896656922,6.1160661838678,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.516833518338658,2.84613010149368,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0.647491777472526,0.561803226808994,0.408308342509787,0.859840221182376,1.13658359293342,0,0.247266929278557,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0,1.61450672119976,1.2813443329114,0.847727604638247,0.900273288253207,0.206105058476878,1.03056216018252,0.744467425326359,0.168776332241266,0,0.504867548488229,0.552299391853796,0.80823028409406,1.42003837006646,0.403008392910561,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,1.14027160516907,0.504641701751257,0.36497735907583,4.69348596989448,6.43240938192885,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,172.38684735769,126.784710951414,232.771223232473,0,0.614942192715568,0.686271241194102,0,0,0,0,0,0,5.77325368101093,10.4337364477569,1.52631302506568,0.144366447761074,0,0,0,0,1.72351904261178,6.78612368903789,3.71577905721821,0,0,0,0,0,0,3.94130590316755,0,0.621984346622316,0.288239906833923,0,2.28592419451809,9.93169906451522,17.582617081507,10.2643467613623,1.7480673759565,0,3.71574362419752,0.336393253036082,0,0,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0,0,0,0,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,2.28685161800217,1.30139853857622,0,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,1.00034104211935,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0.781952530212746,0,0,1.6541442089831,0.647142602455851,0.74709290462411,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0,0.966875596732978,0.200506470303285,0.0920809889358963,0,0.728364672026868,1.04899531967539,1.80479845162965,2.46449078734127,1.56869953835371,0,6.01644284689391,0,0,1.29549549661284,0,0.812839312631559,1.50506932156456,0,0,0.671624264166535,1.09629938322967,2.3529190592241,0.256450125116389,0.328014645699706,0.325378394664303,38.5373383562481,1.28197250745681,2.31026599777646,0,0,0,1.45006077438183,0,0.15350367472613,0,0.751941714077915,0.145016693914229,0.170453254832202,0.623224249527161,0,0,0,0,0,0,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0.744316738719335,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,2.10629228119491,0,0,0,0.409499734223957,0,1.13008116620243,1.10273068709225,0,0,0,0,0.811641507850816,0,0,0,0,1.07001315444375,0,0.633322905892992,0.658589785919804,0,0.349934720244983,0,0,0,35.398069092069,0,0,0,0,0.507447609232169,0,1.13929437434833,1.42939065274673,2.05681136543097,1.94541993357815,1.08006287447623,2.37937552888281,0,0,0,5.75989842889728,3.89526875036401,0.142283686696828,0,0,0,0,1.62310970137278,0,0,0,0,0,0,0.201799707191048,3.40676990152261,0,4.30137070031841,1.56573275524691,1.50164227540718,0.19538809540204,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.703347082052564,1.8922479853894,0,0,4.78195171802567,8.84108529699673,0.251932747854276,14.2153468677995,3.20020494198781,12.1305439188105,0,0,2.55786185113436,1.28236427328014,2.3948309234694,0,7.75466196876175,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0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| ||
|short_description=p1@ABCB4 | |||
}} | }} |
Latest revision as of 21:11, 19 September 2015
Short description: | p1@ABCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCB4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000358400, ENST00000359206, NM_000443, NM_018849, NM_018850, uc003uiv.1, uc003uiw.1, uc003uix.1_5end |
EntrezGene: | ABCB4 |
HGNC: | 45 |
UniProt: | A4D1D5P21439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.44e-13 | 115 |
B cell | 7.65e-13 | 14 |
hematopoietic lineage restricted progenitor cell | 2.92e-12 | 120 |
myeloid lineage restricted progenitor cell | 4.11e-12 | 66 |
monopoietic cell | 5.84e-12 | 59 |
monocyte | 5.84e-12 | 59 |
monoblast | 5.84e-12 | 59 |
promonocyte | 5.84e-12 | 59 |
lymphocyte of B lineage | 8.58e-12 | 24 |
pro-B cell | 8.58e-12 | 24 |
macrophage dendritic cell progenitor | 3.03e-11 | 61 |
defensive cell | 1.62e-10 | 48 |
phagocyte | 1.62e-10 | 48 |
granulocyte monocyte progenitor cell | 3.08e-10 | 67 |
leukocyte | 3.32e-09 | 136 |
myeloid leukocyte | 7.36e-09 | 72 |
classical monocyte | 5.74e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-08 | 42 |
hematopoietic oligopotent progenitor cell | 8.61e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.61e-08 | 161 |
hematopoietic stem cell | 2.73e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-09 | 98 |
blood island | 2.09e-09 | 98 |
hemolymphoid system | 2.18e-09 | 108 |
bone marrow | 6.61e-08 | 76 |
immune system | 7.69e-08 | 93 |
bone element | 8.43e-08 | 82 |
adult organism | 1.51e-07 | 114 |
skeletal element | 9.94e-07 | 90 |