FFCP PHASE1:Hg19::chr10:21813558..21813582,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:21813558..21813582,+ | |||
|coexpression_cluster_id=C976 | |||
|description=CAGE_peak_at_chr10:21813558..21813582,+ | |||
|id=chr10:21813558..21813582,+ | |||
|ontology_enrichment_celltype=CL:0000133!8.77e-10!59;CL:0002319!1.16e-07!25;CL:0000333!2.22e-07!41;CL:0000221!9.79e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.42e-18;5!CL:0002321;1.64e-14;15!CL:0000540;7.94e-10;6!CL:0000404;7.94e-10;6!CL:0002319;1.47e-09;25!CL:0000333;3.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.01e-18,5;CL:0000047,4.51e-11,8;CL:0000133,3.78e-10,59;CL:0000540,1.11e-09,6;CL:0000031,1.11e-09,6;CL:0000404,1.11e-09,6;CL:0002319,1.54e-09,25;CL:0000221,8.62e-08,72;CL:0000333,8.00e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;7.94e-10;6 | |||
|ontology_enrichment_disease=DOID:3095!8.47e-10!22;DOID:2994!8.47e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.15e-09;22!DOID:2994;1.15e-09;22!DOID:171;6.65e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.03e-09,22;DOID:2994,1.03e-09,22;DOID:171,5.10e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-16!94;UBERON:0001016!1.09e-16!94;UBERON:0000924!1.17e-15!173;UBERON:0006601!1.17e-15!173;UBERON:0001017!5.04e-15!82;UBERON:0004121!1.40e-14!169;UBERON:0005743!2.83e-14!86;UBERON:0000153!1.44e-12!129;UBERON:0007811!1.44e-12!129;UBERON:0000033!3.01e-12!123;UBERON:0000955!3.52e-12!69;UBERON:0006238!3.52e-12!69;UBERON:0002346!9.83e-11!90;UBERON:0003056!5.40e-10!61;UBERON:0002780!7.18e-10!41;UBERON:0001890!7.18e-10!41;UBERON:0006240!7.18e-10!41;UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0002616!1.14e-09!59;UBERON:0001893!1.23e-09!34;UBERON:0003080!2.11e-09!42;UBERON:0002791!2.99e-09!33;UBERON:0001869!5.61e-09!32;UBERON:0001049!5.67e-09!57;UBERON:0005068!5.67e-09!57;UBERON:0006241!5.67e-09!57;UBERON:0007135!5.67e-09!57;UBERON:0002020!1.42e-08!34;UBERON:0003528!1.42e-08!34;UBERON:0000956!7.95e-08!25;UBERON:0000203!7.95e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.74e-14;49!UBERON:0000013;3.14e-07;5!UBERON:0002410;3.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-07,89;UBERON:0000013,2.68e-07,5;UBERON:0002410,2.68e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,1.71741592278634,0.547497700291537,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.661743720148475,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0.61246251376468,0.61417158655884,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.875829639103749,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0.504867548488229,0.0920498986422993,0.484938170456436,0,0,0.169560592310488,0,0,0,2.43947412259191,3.18071443971565,1.97529702878181,1.7622379352613,1.7662459561294,6.93456982244077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.811512834825538,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,2.03275699377971,0,1.54657762555539,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0.275673144969061,0.537101224341368,0.290033387828457,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.949138274156178,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,1.00988449083511,0,0,0,0,0.211673582723883,3.89546328329467,0.280797178113459,1.59764275323235,0.156679895773023,2.50634477090067,0.846458889008016,0.642352300414798,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0.811367035427949,0.66614393599564,2.81974010175699,0,0,0.242721043499027,0,0,0,0.593929361665277,0,0,0.422008249231538,0.222617410045812,0,17.1011580583675,0.19924798825107,0,2.01546198283421,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0.874813840149763,0,0,0.844175070377856,0,0,0.591095237907095,0,0,0,0.384751292518985,0,0,0.897576444097721,0.651884231532048,0.31900115973192,0,0,0,0.627921025580099,0,0.451191321234361,0.588187602953219,0,0.37950746544837,0.794682894901893,0,0,0.706765357169704,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0.539209063845416,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,1.83643656978294,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.443175571691151,0,0,0,0,0,0.114536596165916,2.4023299700675,0,0,0.235694034616795,0.135904206073614,0.523014231561666,0.101998217636322,0.577901179803038,0,0.410716136675979,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0,0.399358000997982,0,0,2.75452237195578,0,0,1.02418136999391,1.31865373409866,1.68508859635462,0,0,0.795229689809303,0.817220436669454,1.12527203925513,1.37539436597234,2.49264202817511,0,0,0.485996453264197,0,0.157611414598396,0.524545881349981,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.554645257684261,0.372578417648301,6.64073447693908,0,0,0,0,1.87333962322753,0.869526171664951,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0.622077260032973,5.37156359475337,1.40172254815686,0.471797825567689,1.85656384926424,1.69732529954025,0.425149840203366,1.73510069962603,0.558644917973244,0,0.47317047000752,0.80057074828547,0,0.3062454773532,0.449604575675217,0,0.159633859057151,0.41023272848151,1.00828678488687,0.207471757392654,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0.198916222116275,0.376051641746286,0.20170506870352,0.781514011233092,1.30953347240711,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.28184885410932,0,0.496211178389294,0,0,0,2.69026977775059,0,0.227662191351298,0,0,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0.314231179832004,0.560544326627578,1.82631744101899,0,0,0.500335809236594,16.9074564554017,0.116241425368125,0.347716544605159,0,0,0.51215543128185,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,1.45713297917742,0,0.198950775161368,2.85408217866165,0,3.29821550236287,0.301925687133347,0.308696632431779,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,2.5359343655004,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,1.10440093535229,0.271965960763659,2.18175345170189,1.5870805215462,0.371995018166751,0,0,3.28032704571205,2.18531143927391,5.19463854146892,0.815910637935854,0.26721740526556,0.459474497674225,0.752122617877125,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0.952257725854961,0.258355639344024,0.620747142958579,0,0,0.606351566874658,0.217716747896961,1.71116650542641,0.0673520530145875,0,0,0.244209805832924,0,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr10:21813558..21813582,+ | |||
}} |
Latest revision as of 12:32, 23 July 2015
Short description: | p@chr10:21813558..21813582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21813558..21813582, + |
Coexpression cluster: | C976_anaplastic_small_retinoblastoma_gastrointestinal_merkel_neuroblastoma_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.01e-18 | 5 |
neuronal stem cell | 4.51e-11 | 8 |
neurectodermal cell | 3.78e-10 | 59 |
neuron | 1.11e-09 | 6 |
neuroblast | 1.11e-09 | 6 |
electrically signaling cell | 1.11e-09 | 6 |
neural cell | 1.54e-09 | 25 |
ectodermal cell | 8.62e-08 | 72 |
migratory neural crest cell | 8.00e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.19e-07 | 89 |
sympathetic nervous system | 2.68e-07 | 5 |
autonomic nervous system | 2.68e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.03e-09 | 22 |
germ cell cancer | 1.03e-09 | 22 |
neuroectodermal tumor | 5.10e-09 | 10 |