FFCP PHASE1:Hg19::chr8:124408652..124408712,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:124408652..124408712,-
|short_description=p1@ATAD2
|description=CAGE_peak_1_at_ATAD2_5end
|association_with_transcript=0bp_to_ENST00000287394,ENST000005176...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29028 | |EntrezGene=29028 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30123 | |HGNC=30123 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PL18,E5RIP2 | |UniProt=Q6PL18,E5RIP2 | ||
|association_with_transcript=0bp_to_ENST00000287394,ENST00000517666,NM_014109,uc003yqh.3,uc003yqj.2_5end | |||
|cluster_id=chr8:124408652..124408712,- | |||
|coexpression_cluster_id=C2596 | |||
|description=CAGE_peak_1_at_ATAD2_5end | |||
|id=chr8:124408652..124408712,- | |||
|ontology_enrichment_celltype=CL:0000542!1.15e-07!53;CL:0000051!1.15e-07!53;CL:0000838!2.27e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.15e-07,53;CL:0000051,1.15e-07,53;CL:0000838,2.27e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.73e-63!235;DOID:14566!8.18e-61!239;DOID:0050686!5.47e-33!137;DOID:0050687!7.32e-33!143;DOID:305!4.07e-27!106;DOID:2531!7.15e-22!51;DOID:0060083!7.15e-22!51;DOID:1240!1.43e-19!39;DOID:8692!1.02e-15!31;DOID:7!1.63e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.20e-15;31!DOID:1240;4.08e-15;39!DOID:2531;1.40e-13;51!DOID:0060083;1.40e-13;51!DOID:305;6.53e-09;106!DOID:14566;4.82e-08;239!DOID:0050687;5.14e-08;143!DOID:162;7.96e-08;235!DOID:0050686;9.31e-08;137!DOID:7;8.39e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.81e-63,235;DOID:14566,8.33e-61,239;DOID:0050686,5.56e-33,137;DOID:0050687,7.32e-33,143;DOID:305,4.07e-27,106;DOID:2531,7.15e-22,51;DOID:0060083,7.15e-22,51;DOID:1240,1.43e-19,39;DOID:8692,1.02e-15,31;DOID:7,1.63e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ATAD2 | |||
}} | }} |
Latest revision as of 00:50, 16 September 2015
Short description: | p1@ATAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATAD2_5end |
Coexpression cluster: | C2596_granulocyte_osteosarcoma_rhabdomyosarcoma_embryonic_acute_Saos2_non |
Association with transcript: | 0bp_to_ENST00000287394, ENST00000517666, NM_014109, uc003yqh.3, uc003yqj.2_5end |
EntrezGene: | ATAD2 |
HGNC: | 30123 |
UniProt: | Q6PL18E5RIP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.15e-07 | 53 |
common lymphoid progenitor | 1.15e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.27e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.81e-63 | 235 |
disease of cellular proliferation | 8.33e-61 | 239 |
organ system cancer | 5.56e-33 | 137 |
cell type cancer | 7.32e-33 | 143 |
carcinoma | 4.07e-27 | 106 |
hematologic cancer | 7.15e-22 | 51 |
immune system cancer | 7.15e-22 | 51 |
leukemia | 1.43e-19 | 39 |
myeloid leukemia | 1.02e-15 | 31 |
disease of anatomical entity | 1.63e-08 | 39 |