FFCP PHASE1:Hg19::chr11:64085751..64085768,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9355 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-393bp_to_uc001nzx.2_5end | |||
|cluster_id=chr11:64085751..64085768,+ | |||
|description=CAGE_peak_2_at_PRDX5_5end | |||
|id=chr11:64085751..64085768,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.44e-12!254;CL:0002076!1.59e-10!43;CL:0000548!2.89e-10!679;CL:0000004!2.89e-10!679;CL:0000255!2.89e-10!679;CL:0000012!9.29e-10!682;CL:0000220!5.19e-09!246;CL:0000359!6.66e-09!32;CL:0000223!1.63e-08!59;CL:0002321!2.19e-08!248;CL:0000063!1.45e-07!578;CL:0000192!1.67e-07!42;CL:0000514!1.67e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.53e-08;32!CL:0002076;1.47e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.32e-12,253;CL:0002076,4.82e-10,42;CL:0000359,6.64e-09,32;CL:0002321,1.89e-08,250;CL:0000223,4.15e-08,58;CL:0000192,2.03e-07,43;CL:0000514,2.03e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.46e-10!169;UBERON:0000925!6.46e-10!169;UBERON:0006595!6.46e-10!169;UBERON:0003104!1.18e-08!238;UBERON:0009142!1.18e-08!238;UBERON:0000926!9.64e-08!448;UBERON:0004120!9.64e-08!448;UBERON:0006603!9.64e-08!448;UBERON:0001007!1.07e-07!155;UBERON:0001555!1.07e-07!155;UBERON:0007026!1.07e-07!155;UBERON:0001004!2.53e-07!72;UBERON:0002100!3.58e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.89e-09,160;UBERON:0000925,4.89e-09,160;UBERON:0006595,4.89e-09,160;UBERON:0001004,2.31e-07,74;UBERON:0001007,6.73e-07,145;UBERON:0001555,6.73e-07,145;UBERON:0007026,6.73e-07,145;UBERON:0002100,9.04e-07,199 | |||
|phase1_expression=7.81217030863394,44.7470094932155,7.3296290129905,18.0131937035635,25.4767823823554,23.55314015071,35.4619829435635,3.79031924056099,9.40268261519419,6.14334841253772,30.0054502228144,14.4171305605914,7.91300934685361,4.33182235360163,8.28493439319789,12.7741777825837,10.2458069764076,11.684961446198,9.75865597581014,4.67860020691794,5.71201935483908,6.89600387251793,5.15224776835902,3.96935832711364,6.77930253811935,3.36218985290986,3.69452652524756,3.22714203386085,9.4407426443737,9.97956435052753,4.79929982279836,81.8284889786245,40.3615931162855,24.7735186811748,2.63388481973026,3.41206157969812,3.22960483268332,3.32397245119126,3.81034450193269,5.20826089718044,2.46307021663917,1.94336199611388,2.31818010870768,2.90796477559129,6.42389104270976,5.09426528494414,3.48643555358527,4.11167888021826,7.12324653058738,2.8769239232215,3.84241059793651,7.80391358632331,3.44745680736619,0.645484683583826,5.41705946377367,5.08254316765033,5.45812300115692,10.562003768919,4.28517449319264,7.38136762275015,7.67204550958849,4.94776950280074,2.19410023383795,6.39337125799041,4.93355705668593,5.10646702222026,7.4738669879469,3.01498398308092,6.25779502104242,5.64690996233303,9.08099253950053,6.99727508376373,8.54448446090388,8.66146673878961,3.82687739937078,9.22498040236854,6.40273197535022,5.70672192797724,4.8217676009124,4.84521664360123,2.38700012638908,3.65328307529268,3.51992488922645,0.546138611262131,0.889509253863555,1.70692089026603,0.800791974072025,3.4485146397269,4.62731410949403,1.90810750907073,2.84606484554724,1.76171156811282,0.382273228125229,1.32171328579026,5.04457706683382,2.63384084775077,1.180258620683,8.25322601773246,5.34563897398724,1.33749196312542,0.977766799900771,0.473447805734733,1.94826728407911,1.89397776704795,1.47302953737419,1.55073726208535,1.35401931882508,2.30564375506215,2.08094956095805,1.31550323682941,2.48715016007264,1.73881851441031,0.14828656316206,0.535081656179426,1.04535523804977,1.24640276967323,1.14966148080576,1.37450978193052,0.506039384039006,0.95569624297229,1.30216690771284,2.85135613334512,1.6563263098555,0.76791966692651,2.49861453104692,1.89421801635213,0.821127996921047,6.24980903996671,9.89528724398977,7.24122019413995,14.6284119788377,8.04841031644363,5.75381528295886,9.03597880961416,12.5334477658972,7.09747942908036,5.5670016293577,15.5723158496843,4.15953195521899,5.98669373148923,5.53359149866694,3.66741411393595,56.8300649736366,34.4829531789519,4.21911611751088,3.65672448328461,3.32394901297163,9.53962497221368,8.57992366170192,13.7439275491939,4.57153536943422,8.60234595106124,3.47140501607594,8.47961912886015,3.35599548967925,2.75118041940067,2.71693456497854,5.94358546089456,1.77883131343355,3.68192674041137,5.23678112241891,16.7259863258073,4.88124115096339,4.77962004449629,7.29127753093584,2.94689103337463,4.26605807989723,4.0540132973996,7.66583187329416,7.59412527654503,6.22885929363385,31.6273001846552,27.1446184903828,42.3011230578258,19.8788780678127,13.2962037247809,8.60659675285922,7.17091551872034,10.2853830837524,25.7911696065461,21.349799145941,24.666754841716,2.8008993185979,7.40908696383284,5.23078089963068,9.53551794163068,11.5235184896,1.87457145467037,7.49184184392769,6.84566185853339,4.18456305545043,1.64408298101271,1.78060238804945,1.40450806702248,6.53293348015658,3.0708579327942,4.75298593408521,9.50402285825643,9.89067717114228,4.55080680969013,12.2165084108761,2.69337782326506,1.7516592782075,2.21651292387346,11.8523957637826,14.4049264025539,9.314759652209,8.39398155384156,3.40840307808838,8.96941033037983,5.93409323246773,2.40072876867522,6.90451945897541,13.6549486224183,14.517114793864,4.38818463827292,10.815507572893,5.80597680761463,7.73219148595314,5.17267381820198,5.68015348026583,8.16091995643886,5.93462073086707,70.5402114046033,29.1838349032193,50.4776087884647,0.975789649036763,0.927708378250397,1.74290914304278,3.93912009058408,3.28017106138317,0.36497735907583,12.5159625863853,11.5783368874719,9.66944449467364,5.57241513638375,26.7095408217747,15.0249636050602,15.5097914871854,12.2915625240576,15.7720381007323,20.0449088565014,14.4735077657769,18.067395293462,19.4259250474093,19.2373578473195,5.90524363699719,2.80483547606892,5.3504621473082,7.3504355692771,26.6185573125845,12.7767538168091,12.4065880403095,1.7658523976586,13.1597629241132,4.80389868835872,41.046606742826,41.5886487053192,15.8835776410377,5.18495292887766,4.23550796903422,6.23960871167747,1.44331342025273,5.10093781890338,10.9190085639314,7.65142173133691,5.09284063834272,5.70762456703795,6.3216351836742,13.735778593518,3.44703808522356,3.04205544681009,4.01304138179566,100.295202365851,79.4555466380606,46.5022318955028,20.688018744358,25.2851526507147,34.8878238040342,1.47798971368783,1.32072651019839,1.4512968087854,0.432359860250884,1.2624243342638,1.46045156871989,3.81988425558278,2.34434894420094,6.84289784090821,1.02827492703324,4.80548892550268,2.00078502841405,3.58819469905154,1.30788020649984,2.0534720029866,12.9271715757778,39.3422090437071,4.22651376278,13.5628439458284,14.5610411675913,4.37252536245642,2.83698264046557,4.26275486425759,4.28933980974443,8.68194568626309,0.823240336780769,2.93162565864362,4.6200953336531,3.16780749173372,12.359014459443,20.9168030064071,8.19778527692868,3.64871341923571,2.51128545716063,8.43335757932127,18.4511138728519,9.18895486672911,7.13184525203592,22.006758613472,7.60262393436419,9.49023105171447,6.164682919644,7.88123040807709,9.9188684435378,13.6043618456533,2.28685161800217,1.30139853857622,4.63973287666617,4.85797169469611,3.18969375826582,5.24304916763028,8.97484377612075,3.31532410748828,0.736148950314839,4.50153468953709,6.78162559249339,4.99130067673937,9.8135943838439,10.4083593922397,6.09135357962109,8.12554469264841,43.2074257706371,13.4514992680256,1.99267679560631,12.1683651237524,6.77692192851046,27.0205597298582,9.26487244289311,2.06768026122887,3.01999881146064,2.98837161849644,19.7032921440069,9.98612637062982,5.44302527993425,15.8788997004017,9.66810431714793,15.9976253826852,12.6857757763144,14.8395102229344,11.5814823223397,28.1994326245483,2.62156479464514,7.81271591377759,2.05317890034523,3.63478100428535,6.04293967991788,9.06445871937167,45.1139558182391,22.191518333551,6.7740524417118,5.09855270418808,7.34296723772775,9.02399225814824,4.23584354074281,9.41219723012226,10.2297457257282,3.4832037534649,9.09867072567173,9.35515379020836,5.61381381865562,7.71136263451447,7.85744668877173,10.0337954770971,7.90116446439619,9.97291210714469,8.05949116999842,4.82371728621056,6.53588627562251,5.38545262744417,3.93617574839647,4.55529752530024,4.84292754744295,8.24125183365091,7.50836449277351,13.7823729119081,23.4021688573148,9.64103579064957,1.64340221096607,4.31336127921004,3.37708084397485,1.10269257987624,1.50388342815583,2.61030049045611,1.44885266607372,3.47224939022276,38.015530533025,26.3300392290195,6.63586104971837,16.0840871560324,19.9883586197833,5.03699754929024,19.5170435644968,5.23657086299351,25.0183834249,14.7888608652762,20.756312539639,25.1899800665905,18.980076837343,13.2879358381865,12.009702217201,8.95642269589669,6.84702380854273,7.31867470229655,20.40866464518,7.55464321849922,7.41249980287348,5.30155810555589,24.6662627519446,58.648818834013,23.169215093144,4.8763373908959,6.58026422004468,24.2995337540537,5.45999645631943,6.08043357400965,13.5609739944291,11.0273068709225,15.2590964305481,23.2378969184494,9.260408548267,7.21484227251296,24.9579763664126,17.350115893586,13.8030845240798,2.86822704408103,10.2179002653646,17.1202104711,4.96665489698837,12.6664581178598,12.1839110395164,4.9331512589543,8.39843328587959,23.7668618432015,42.2290433587546,19.6003772750381,6.59006605437454,42.6200318944518,45.4872984302589,61.1933611880612,14.9320210134524,6.5968189200182,7.64637207142375,5.12682468456746,6.67048971281809,7.4045209155515,8.43015304550532,5.94034580961926,11.1037524681198,4.16613877397145,8.66231869737023,14.4573727428809,2.04383492638291,0.865615277858669,0.426851060090485,0.637705090915289,2.99369057149225,5.36215036370627,25.1891563441421,6.16781686521655,5.33514638415572,4.56469358066384,1.09675927041116,10.0253790836027,8.29529711227856,1.2847046008296,2.01799707191048,10.6461559422582,15.1142351692536,3.6868891717015,4.02616994206349,3.50383197595008,2.14926904942244,18.374807477086,7.38524393686274,5.95002492647163,3.66379164797602,7.04935025439248,2.43282702530686,1.75809815126273,6.67482869622324,4.68062213965409,2.27308917445131,26.2618933211459,8.61197574414652,14.7437137007631,3.97659059106519,1.68803299692615,6.01067007123692,5.76813559793659,0.211125408127993,4.5827037297746,13.8141957765574,1.76352923497993,2.35217969754956,0.861593638227486,17.1071773213994,7.00973138949149,7.16084698702437,4.09257896181497,3.25523238601881,4.7896618469388,15.5591786202492,5.81599647657131,3.24688343566479,1.99613798001194,13.0213880542617,2.88617999987446,2.17499872630438,7.96554137998498,4.83081935556256,11.8193840883968,3.44743373241465,1.16641845353302,4.68787486319889,6.20018970069687,1.32656082487949,6.10326945268333,4.64432891711143,12.412999996049,13.6018946235463,3.59496929612668,22.8654940616909,4.15531395920504,7.97594390929008,1.1528195219403,0.718061155278177,1.95565269459615,32.8571194523877,21.2506416692321,33.0481561131554,6.13159789174419,2.98262487150547,9.64027755020907,0.902382642468723,0.19606253431774,0,0.37950746544837,1.74830236878417,1.89898258075224,10.2836669140263,10.8841865004134,9.95387742813619,40.8057391742187,14.6839557075543,20.7750249277433,11.5643240185443,16.1868760019919,16.9163558198838,5.12248610653146,1.60515529459758,7.49646226321085,1.45963831372533,21.914437320394,13.3529208743751,6.70793484843964,2.41981432097328,7.34574627913176,1.45329133145522,4.96067284067825,2.48851659353393,11.2991158360221,5.29587129400798,12.2433838178818,10.7525186795663,0.569219092059585,7.21108299668321,7.2895090100755,18.1285935216599,21.0683279924574,14.3275867958465,2.57979048707425,25.3501587977403,15.6411138564437,24.1419443736435,16.0031877205892,16.592151818002,4.51961481561065,4.52238351334278,12.3203059255854,2.59574263419103,9.77756913674015,3.28651163031288,8.5381197895741,16.3843879857347,5.33134543470192,6.87219576995494,3.77508995296322,5.47408232354969,8.44917241844941,19.562604873194,10.0569112494474,12.3431358648553,5.71190018763402,2.88950589901519,2.40168115483916,1.09524303113594,0,8.16554338697919,3.94331031418972,7.26134243307861,4.12488763221031,7.89660327034495,3.79390100948083,5.15071257763885,6.24880080837243,1.20930250476107,7.20599767084807,2.32991899054908,1.41809728153003,1.7307330260045,2.02210631562555,6.59464126148817,3.21758661849981,6.36183751847443,2.04305109167363,1.92903778158023,1.10031549277787,3.32352270423348,3.37460837327251,3.86900977278975,1.94398581305679,12.4110834411728,4.2555081941567,1.20645552710496,6.23041985464498,10.398665681305,14.0098094043195,5.00286728461357,5.29673576292345,6.35671344136875,16.8329876543651,24.1982017536355,11.7571449639387,1.19730191562487,5.17182880720835,8.86017713284193,7.02534967424779,8.20692508597262,11.9256200020999,10.9890512907318,5.42153667145029,7.01456035325751,24.6685257810835,11.2126783196079,8.80344108558129,10.3559763836799,1.9846640872478,5.92834895693833,2.67943716437971,13.4051664131738,17.9525875111926,15.041393641362,11.947477493775,13.442777859102,1.09937867375164,1.77213635993397,2.07444650333337,2.50381861413,37.8450069155447,9.42896938063245,5.71286907060728,1.10678907948985,7.24886366180218,5.91431558412426,1.14186133417987,7.05797459094515,2.34167452903441,1.44921028610825,9.85081699053369,7.24511260526396,11.6509230915549,4.35626912132705,9.81114816835043,17.7962244319307,26.0877677972493,11.3423192822429,10.2588552384635,14.0462392490152,9.23921249549474,14.3936995892353,10.4026181107094,7.05000553329454,15.9505028734797,15.1306067925403,5.55953153289708,14.0897928502454,10.1717683301165,7.27394636810238,12.6744457310136,9.74470895744837,7.96191777397232,7.60052752859992,14.4226196176773,14.8169775057004,12.6184898228651,24.4627184617275,22.7308086857421,13.0497145982606,12.0154140521504,2.31522474323834,15.9078857929204,5.7308429146076,12.3520578864389,12.2799067764076,20.849319221614,20.8347161332588,15.8805894213888,12.0433513736335,24.5255542629151,14.8891378526917,1.7973596699725,8.76871389777248,8.90194430099533,10.468185232374,11.7939545584709,24.0857450578645,11.4108546613659,10.5993319803113,2.98736843143594,28.2432566643738,9.64777121063621,15.8331117216583,26.0175884358167,13.6856997207254,1.53473245564382,1.07824811396682,2.51625506969434,2.40261204022431,3.22491806912648,1.2754495206101,3.09839410647505,1.67593475391973,13.674187078097,1.1829261750188,6.40456598628376,8.8168985922671,15.31227386766,2.6976274540513,4.25089728976755,2.07524016774297,4.92279274177812,5.04143392443436,3.38870537074668,5.97459888837849,4.28308260777463,55.3553132345784,3.18518253038899,28.4314327708602,6.58496297056928,11.441462864015,5.52287940848081,12.5317219933253,1.35378591028663,8.87502302295488,5.47059807863165,1.83334686136996,16.2134198334996,6.06209953489886,2.83657855397258,0.781078098613847,1.65349437200947,2.34638497717455,2.7348740450911,14.2547019382867,2.97726707033577,1.75871244359621,26.5745849490358,9.10693120993088,1.68141861109412,0.606965604236632,0.91064876540519,6.12046354122208,3.57225361422916,9.94630454737027,7.13682196256733,3.28863867814245,4.13678443093889,7.23004112298449,4.00314773537622,0.628462359664008,3.36326595976547,1.82631744101899,10.3645243784938,0,4.00268647389276,1.58013611732727,1.27865567904938,3.47716544605159,2.40513409419076,20.0999679238146,21.3398096367437,52.535734297871,18.4997764292719,2.12997601315018,2.8120423570522,20.3225784091646,30.7003203849027,47.1513706209766,10.5109283287518,24.8319058591099,6.47791541860604,8.65617267374113,3.88457302312737,1.53994210284371,3.4794432940146,3.88568794447312,8.88969961156001,4.57586782871147,0.713520544665411,2.2589216407792,0.109940516745429,9.20873345756709,13.968522617538,2.18559560503957,8.93602863086893,0.490296643507811,14.1405928260976,2.55201007249429,1.18818560130834,8.453114551668,16.1430758953426,2.16163011353663,2.06265241515447,5.79658704364588,7.85637329864893,59.2863384482362,10.2708949362135,10.2247094354512,15.1380663523498,1.29005624836306,0.946629373159108,3.73953196050031,3.49080552272302,5.290268405154,9.29987545416878,9.70568820125978,10.3830374909709,1.00933139868063,0.98339014767326,1.77377901416012,4.18154201942125,1.3360870263278,2.11358268930143,0.752122617877125,2.19758224832894,2.94760543171796,4.97501663675268,1.44806194206653,15.1396127149696,9.76064169001335,1.42095601639213,0.806971285846153,8.52202155612662,24.6314502536498,21.0201876516548,9.36182015956934,4.79126621519393,9.56399152807143,13.6989412300012,5.32256570473621,5.61682553415724,3.30854772220918,9.653614114347,12.3060526886024,4.69281884806909,1.71138021856013,6.10344267473608,3.32878387092756,1.81146414231924,3.52625341533556 | |||
|short_description=p2@PRDX5 | |||
}} |
Latest revision as of 03:04, 19 September 2015
Short description: | p2@PRDX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDX5_5end |
Coexpression cluster: | NA |
Association with transcript: | -393bp_to_uc001nzx.2_5end |
EntrezGene: | PRDX5 |
HGNC: | 9355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.32e-12 | 253 |
endo-epithelial cell | 4.82e-10 | 42 |
vascular associated smooth muscle cell | 6.64e-09 | 32 |
embryonic cell | 1.89e-08 | 250 |
endodermal cell | 4.15e-08 | 58 |
smooth muscle cell | 2.03e-07 | 43 |
smooth muscle myoblast | 2.03e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.89e-09 | 160 |
endoderm | 4.89e-09 | 160 |
presumptive endoderm | 4.89e-09 | 160 |
respiratory system | 2.31e-07 | 74 |
digestive system | 6.73e-07 | 145 |
digestive tract | 6.73e-07 | 145 |
primitive gut | 6.73e-07 | 145 |
trunk | 9.04e-07 | 199 |