FFCP PHASE1:Hg19::chr8:128900203..128900207,+: Difference between revisions
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|id=chr8:128900203..128900207,+
|short_description=p@chr8:128900203..128900207,+
|description=CAGE_peak_at_chr8:128900203..128900207,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:128900203..128900207,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr8:128900203..128900207,+ | |||
|id=chr8:128900203..128900207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.27e-34;2!CL:0002563;8.00e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.04e-34,2;CL:0002563,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.42e-09!235;DOID:14566!2.28e-08!239;DOID:3910!7.47e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.80e-20;14!DOID:171;5.93e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004903!7.47e-07!2;UBERON:0002173!7.47e-07!2;UBERON:0002186!7.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.00e-18;4!UBERON:0001242;8.00e-18;4!UBERON:0002346;8.00e-18;4!UBERON:0000923;8.00e-18;4!UBERON:0010316;8.00e-18;4!UBERON:0001262;8.00e-18;4!UBERON:0004786;8.00e-18;4!UBERON:0004808;8.00e-18;4!UBERON:0001277;8.00e-18;4!UBERON:0005291;8.00e-18;4!UBERON:0002050;1.50e-14;5!UBERON:0005423;1.50e-14;5!UBERON:0004907;1.50e-14;5!UBERON:0000485;8.57e-11;7!UBERON:0003929;8.57e-11;7!UBERON:0003350;1.30e-09;8!UBERON:0001155;1.08e-08;9!UBERON:0000059;2.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.69e-18,4;UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0003350,1.35e-09,8;UBERON:0001155,1.12e-08,9;UBERON:0000485,1.12e-08,9;UBERON:0000059,2.47e-07,11 | |||
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| ||
|short_description=p@chr8:128900203..128900207,+ | |||
}} | }} |
Latest revision as of 14:57, 31 July 2015
Short description: | p@chr8:128900203..128900207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128900203..128900207, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.04e-34 | 2 |
intestinal epithelial cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.69e-18 | 4 |
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
epithelium of mucosa | 1.35e-09 | 8 |
colon | 1.12e-08 | 9 |
simple columnar epithelium | 1.12e-08 | 9 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.13e-20 | 14 |
neuroectodermal tumor | 5.73e-08 | 10 |