FFCP PHASE1:Hg19::chr12:102437910..102437918,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:102437910..102437918,- | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr12:102437910..102437918,- | |||
|id=chr12:102437910..102437918,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.32e-26;2!CL:0002563;8.82e-14;4!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.32e-26,2;CL:0002563,8.82e-14,4;CL:0000540,1.57e-09,6;CL:0000031,1.57e-09,6;CL:0000404,1.57e-09,6;CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.98e-21;10!UBERON:0005564;8.98e-21;10!CL:0000031;1.50e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006331!6.57e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.18e-25;8!UBERON:0003135;5.38e-19;11!UBERON:0001052;8.82e-14;4!UBERON:0001242;8.82e-14;4!UBERON:0001262;8.82e-14;4!UBERON:0004786;8.82e-14;4!UBERON:0004808;8.82e-14;4!UBERON:0001277;8.82e-14;4!UBERON:0004907;2.66e-11;5!UBERON:0000991;1.73e-10;21!UBERON:0003101;4.64e-10;22!UBERON:0000079;4.64e-10;22!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8!UBERON:0001155;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0001052,8.82e-14,4;UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0004907,2.66e-11,5;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0003350,1.49e-07,8;UBERON:0001155,7.48e-07,9;UBERON:0000485,7.48e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6014803575456,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,1.51557396436479,3.48353369203032,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:102437910..102437918,- | |||
}} |
Latest revision as of 04:05, 24 July 2015
Short description: | p@chr12:102437910..102437918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:102437910..102437918, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.32e-26 | 2 |
intestinal epithelial cell | 8.82e-14 | 4 |
neuron | 1.57e-09 | 6 |
neuroblast | 1.57e-09 | 6 |
electrically signaling cell | 1.57e-09 | 6 |
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.11e-25 | 8 |
male reproductive organ | 5.14e-19 | 11 |
rectum | 8.82e-14 | 4 |
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
lower digestive tract | 2.66e-11 | 5 |
gonad | 1.69e-10 | 21 |
indifferent external genitalia | 1.69e-10 | 21 |
indifferent gonad | 1.69e-10 | 21 |
gonad primordium | 1.69e-10 | 21 |
external genitalia | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
epithelium of mucosa | 1.49e-07 | 8 |
colon | 7.48e-07 | 9 |
simple columnar epithelium | 7.48e-07 | 9 |