FFCP PHASE1:Hg19::chr12:53200523..53200541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:53200523..53200541,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200523..53200541,- | |||
|id=chr12:53200523..53200541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.95e-20;1!UBERON:0008814;2.07e-10;2!UBERON:0010056;2.07e-10;2 | |||
|ontology_enrichment_disease=DOID:178!2.99e-07!1;DOID:326!2.99e-07!1;DOID:3978!2.99e-07!1;DOID:3394!2.99e-07!1;DOID:5844!2.99e-07!1;DOID:3151!3.57e-07!1;DOID:3149!3.57e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.91e-19;1!DOID:178;3.91e-19;1!DOID:326;3.91e-19;1!DOID:3978;3.91e-19;1!DOID:3394;3.91e-19;1!DOID:5844;3.91e-19;1!DOID:3149;3.91e-19;1!DOID:3451;2.99e-10;2!DOID:4159;2.99e-10;2!DOID:114;2.99e-10;2!DOID:0060122;2.99e-10;2!DOID:3910;2.99e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:3151,4.69e-19,1;DOID:3149,4.69e-19,1;DOID:114,2.49e-10,2;DOID:3910,2.72e-10,2;DOID:3451,3.27e-10,2;DOID:4159,3.27e-10,2;DOID:0060122,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!9.39e-13!2;UBERON:0003127!2.10e-12!2;UBERON:0001723!5.94e-09!3;UBERON:0001033!5.94e-09!3;UBERON:0010056!5.94e-09!3;UBERON:0000065!7.54e-09!53;UBERON:0006562!1.16e-08!11;UBERON:0002372!2.82e-07!1;UBERON:0001961!2.82e-07!1;UBERON:0001744!2.82e-07!1;UBERON:0001735!2.82e-07!1;UBERON:0000989!5.69e-07!1;UBERON:0008811!5.69e-07!1;UBERON:0006258!5.69e-07!1;UBERON:0005876!5.69e-07!1;UBERON:0004874!5.69e-07!1;UBERON:0002171!6.38e-07!1;UBERON:0006518!6.38e-07!1;UBERON:0008949!6.38e-07!1;UBERON:0000101!6.38e-07!1;UBERON:0002167!6.38e-07!1;UBERON:0004119!8.50e-07!169;UBERON:0000925!8.50e-07!169;UBERON:0006595!8.50e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.99e-25;3!UBERON:0001033;2.99e-25;3!UBERON:0002372;2.25e-19;1!UBERON:0001961;2.25e-19;1!UBERON:0001744;2.25e-19;1!UBERON:0001042;2.25e-19;1!UBERON:0001735;2.25e-19;1!UBERON:0000341;1.72e-10;2!UBERON:0006562;2.27e-10;2!UBERON:0004903;2.99e-10;2!UBERON:0002173;2.99e-10;2!UBERON:0002186;2.99e-10;2!UBERON:0001043;1.82e-07;3!UBERON:0004821;2.97e-07;3!UBERON:0007499;2.97e-07;3!UBERON:0003215;2.97e-07;3!UBERON:0010368;2.97e-07;3!UBERON:0009911;2.97e-07;3!UBERON:0002299;2.97e-07;3!UBERON:0006524;2.97e-07;3!UBERON:0008874;2.97e-07;3!UBERON:0002169;2.97e-07;3!UBERON:0004894;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.99e-25,3;UBERON:0001033,2.99e-25,3;UBERON:0010056,2.99e-25,3;UBERON:0002372,2.25e-19,1;UBERON:0001961,2.25e-19,1;UBERON:0001744,2.25e-19,1;UBERON:0001735,2.25e-19,1;UBERON:0001042,5.26e-17,10;UBERON:0009145,5.26e-17,10;UBERON:0006562,1.60e-15,11;UBERON:0000341,1.72e-10,2;UBERON:0004903,2.72e-10,2;UBERON:0002173,2.72e-10,2;UBERON:0002186,2.72e-10,2;UBERON:0001557,2.98e-09,19;UBERON:0000166,4.55e-08,22;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3;UBERON:0004821,2.79e-07,3;UBERON:0003215,2.79e-07,3;UBERON:0010368,2.79e-07,3;UBERON:0009911,2.79e-07,3;UBERON:0002299,2.79e-07,3;UBERON:0006524,2.79e-07,3;UBERON:0008874,2.79e-07,3;UBERON:0002169,2.79e-07,3;UBERON:0004894,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2917915447673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,17.6520010008923,0,0.451961481561065,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3675709502569,0.714193294391221,0,0,0,0,0,8.05551967218757,15.0582652477524,3.16554649168561,0.645499848534087,0.665320713092027,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p@chr12:53200523..53200541,- | |||
}} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200523..53200541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200523..53200541, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.99e-25 | 3 |
gustatory system | 2.99e-25 | 3 |
future tongue | 2.99e-25 | 3 |
tonsil | 2.25e-19 | 1 |
mucosa-associated lymphoid tissue | 2.25e-19 | 1 |
lymphoid tissue | 2.25e-19 | 1 |
tonsillar ring | 2.25e-19 | 1 |
chordate pharynx | 5.26e-17 | 10 |
pharyngeal region of foregut | 5.26e-17 | 10 |
pharynx | 1.60e-15 | 11 |
throat | 1.72e-10 | 2 |
bronchoalveolar duct junction | 2.72e-10 | 2 |
alveolar duct | 2.72e-10 | 2 |
bronchiole | 2.72e-10 | 2 |
upper respiratory tract | 2.98e-09 | 19 |
oral opening | 4.55e-08 | 22 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |
pulmonary alveolus epithelium | 2.79e-07 | 3 |
alveolus | 2.79e-07 | 3 |
pulmonary lobule | 2.79e-07 | 3 |
lobule | 2.79e-07 | 3 |
alveolus of lung | 2.79e-07 | 3 |
alveolar system | 2.79e-07 | 3 |
pulmonary acinus | 2.79e-07 | 3 |
alveolar sac | 2.79e-07 | 3 |
alveolar wall | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.71e-19 | 1 |
ischemia | 2.71e-19 | 1 |
extrinsic cardiomyopathy | 2.71e-19 | 1 |
myocardial ischemia | 2.71e-19 | 1 |
myocardial infarction | 2.71e-19 | 1 |
skin squamous cell carcinoma | 4.69e-19 | 1 |
keratoacanthoma | 4.69e-19 | 1 |
heart disease | 2.49e-10 | 2 |
lung adenocarcinoma | 2.72e-10 | 2 |
skin carcinoma | 3.27e-10 | 2 |
skin cancer | 3.27e-10 | 2 |
integumentary system cancer | 3.27e-10 | 2 |