FFCP PHASE1:Hg19::chr8:134114832..134114863,-: Difference between revisions
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|id=chr8:134114832..134114863,-
|short_description=p9@SLA
|description=CAGE_peak_9_at_SLA_5end
|association_with_transcript=0bp_to_ENST00000517648,ENST00000517932,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6503 | |EntrezGene=6503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |HGNC=10902 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4J2,E5RJB0,E5RK29,E5RGG0 | |UniProt=B7Z4J2,E5RJB0,E5RK29,E5RGG0 | ||
|association_with_transcript=0bp_to_ENST00000517648,ENST00000517932,ENST00000519558,ENST00000519747,ENST00000521302_5end | |||
|cluster_id=chr8:134114832..134114863,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_9_at_SLA_5end | |||
|id=chr8:134114832..134114863,- | |||
|ontology_enrichment_celltype=CL:0000047!6.11e-14!8;CL:0000540!2.35e-07!6;CL:0000031!2.35e-07!6;CL:0000404!2.35e-07!6;CL:0002319!5.86e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.10e-25;6!CL:0000404;1.10e-25;6!CL:0002319;2.94e-10;25!CL:0000047;9.46e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.04e-33,8;CL:0000540,1.10e-25,6;CL:0000031,1.10e-25,6;CL:0000404,1.10e-25,6;CL:0002319,2.94e-10,25;CL:0000133,7.28e-07,59;CL:0002567,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.10e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002022;1.44e-17;1!UBERON:0001950;5.78e-13;20!UBERON:0002619;7.25e-12;22!UBERON:0000956;1.56e-10;25!UBERON:0000203;1.56e-10;25!UBERON:0000922;3.62e-08;49!UBERON:0002791;1.41e-07;32!UBERON:0001869;2.32e-07;32!UBERON:0003528;4.58e-07;34!UBERON:0002020;4.58e-07;34!UBERON:0002114;9.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,1.70e-17,1;UBERON:0001017,1.52e-15,81;UBERON:0001016,5.86e-14,89;UBERON:0001950,5.96e-13,20;UBERON:0002619,7.46e-12,22;UBERON:0000956,1.60e-10,25;UBERON:0000203,1.60e-10,25;UBERON:0002791,2.39e-08,32;UBERON:0001869,2.39e-08,32;UBERON:0003528,6.93e-08,34;UBERON:0002020,6.93e-08,34;UBERON:0001893,6.93e-08,34;UBERON:0004121,5.15e-07,171;UBERON:0000924,5.15e-07,171;UBERON:0006601,5.15e-07,171;UBERON:0002114,9.12e-07,2 | |||
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| ||
|short_description=p9@SLA | |||
}} | }} |
Latest revision as of 15:31, 16 September 2015
Short description: | p9@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLA_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000517648, ENST00000517932, ENST00000519558, ENST00000519747, ENST00000521302_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | B7Z4J2E5RJB0E5RK29E5RGG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.04e-33 | 8 |
neuron | 1.10e-25 | 6 |
neuroblast | 1.10e-25 | 6 |
electrically signaling cell | 1.10e-25 | 6 |
neural cell | 2.94e-10 | 25 |
neurectodermal cell | 7.28e-07 | 59 |
light melanocyte | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
insula | 1.70e-17 | 1 |
central nervous system | 1.52e-15 | 81 |
nervous system | 5.86e-14 | 89 |
neocortex | 5.96e-13 | 20 |
regional part of cerebral cortex | 7.46e-12 | 22 |
cerebral cortex | 1.60e-10 | 25 |
pallium | 1.60e-10 | 25 |
regional part of telencephalon | 2.39e-08 | 32 |
cerebral hemisphere | 2.39e-08 | 32 |
brain grey matter | 6.93e-08 | 34 |
gray matter | 6.93e-08 | 34 |
telencephalon | 6.93e-08 | 34 |
ectoderm-derived structure | 5.15e-07 | 171 |
ectoderm | 5.15e-07 | 171 |
presumptive ectoderm | 5.15e-07 | 171 |
duodenum | 9.12e-07 | 2 |