FFCP PHASE1:Hg19::chr12:75875762..75875778,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:75875762..75875778,+ | |||
|description=CAGE_peak_at_chr12:75875762..75875778,+ | |||
|id=chr12:75875762..75875778,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.11e-10!65;CL:0002194!1.49e-10!63;CL:0000576!1.49e-10!63;CL:0000040!1.49e-10!63;CL:0000559!1.49e-10!63;CL:0002057!1.66e-09!42;CL:0000680!2.27e-09!57;CL:0000056!2.27e-09!57;CL:0000355!2.27e-09!57;CL:0000048!3.40e-09!430;CL:0000723!6.35e-09!436;CL:0000557!6.54e-09!71;CL:0000034!1.33e-08!444;CL:0000839!1.67e-08!70;CL:0000766!1.92e-08!76;CL:0000860!2.27e-08!45;CL:0000187!7.95e-08!54;CL:0000055!1.64e-07!180;CL:0000359!3.70e-07!32;CL:0000192!8.78e-07!42;CL:0000514!8.78e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.46e-27;3!CL:0002595;5.40e-08;5!CL:0000451;6.51e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.91e-27,3;CL:0002595,6.77e-08,5;CL:0000451,6.99e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.70e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.29e-27;3!DOID:127;5.29e-27;3!DOID:0060072;2.02e-20;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.26e-27,3;DOID:127,3.26e-27,3;DOID:0060072,1.41e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.32e-15!167;UBERON:0002371!2.60e-10!80;UBERON:0003081!9.68e-10!216;UBERON:0002390!3.45e-09!102;UBERON:0003061!3.45e-09!102;UBERON:0001474!8.57e-09!86;UBERON:0004765!1.44e-08!101;UBERON:0001434!1.44e-08!101;UBERON:0002385!3.51e-08!63;UBERON:0001015!3.51e-08!63;UBERON:0000383!3.51e-08!63;UBERON:0001134!3.63e-08!61;UBERON:0002036!3.63e-08!61;UBERON:0003082!3.63e-08!61;UBERON:0004290!7.27e-08!70;UBERON:0002193!9.95e-08!112;UBERON:0000914!1.98e-07!83;UBERON:0002329!1.98e-07!83;UBERON:0003077!1.98e-07!83;UBERON:0003059!1.98e-07!83;UBERON:0007282!1.98e-07!83;UBERON:0009618!1.98e-07!83;UBERON:0007285!1.98e-07!83;UBERON:0001637!2.68e-07!42;UBERON:0003509!2.68e-07!42;UBERON:0004572!2.68e-07!42;UBERON:0004573!4.79e-07!33;UBERON:0004571!4.79e-07!33;UBERON:0000486!4.92e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.61e-10;1!UBERON:0003834;5.40e-08;5!UBERON:0001533;5.40e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.55e-10,1;UBERON:0003834,6.77e-08,5;UBERON:0001533,6.77e-08,5 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0,0,0.581592955118259,0,0.727752183563449,0.464858073811369,0,0.309706370895104,0,0,0,1.72372840368309,1.29096936716765,2.70852973188684,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0.616804496998528,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.289693037921647,0.795285947051099,0,0.0945348171640679,0.443458794925128,0,0,0,0,0,0.174129737299267,0.26591592103773,3.10037811596945,4.0039643754609,2.60020250930695,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.37223371266318,0,0.779496041289589,0,0,0.323292113637624,1.06502877754984,0.705264687593482,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0,0.500170521059677,0,0.831883446123229,1.07057393278297,0.315404830067869,0,0.601892199455438,4.5481500811197,0,0,0,0.434418072340414,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,1.66791797193528,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0.66343897524122,4.38450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0.5085370753095,3.80099721227599,1.72844298240254,2.61269888087527,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0.464033759878494,0.796191777397232,0,0.686791410365586,0,0,0,0.214441591374926,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0.06445788797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| |||
|short_description=p@chr12:75875762..75875778,+ | |||
}} |
Latest revision as of 12:24, 24 July 2015
Short description: | p@chr12:75875762..75875778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:75875762..75875778, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.91e-27 | 3 |
smooth muscle cell of the subclavian artery | 6.77e-08 | 5 |
dendritic cell | 6.99e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.55e-10 | 1 |
thoracic segment blood vessel | 6.77e-08 | 5 |
subclavian artery | 6.77e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.26e-27 | 3 |
leiomyoma | 3.26e-27 | 3 |
benign neoplasm | 1.41e-20 | 4 |