FFCP PHASE1:Hg19::chr13:47127445..47127455,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23143 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20309 | |||
|TSSclassifier=strong | |||
|UniProt=F8W6F0 | |||
|association_with_transcript=50bp_to_ENST00000389797_5end | |||
|cluster_id=chr13:47127445..47127455,+ | |||
|description=CAGE_peak_6_at_LRCH1_5end | |||
|id=chr13:47127445..47127455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.19e-16;5!CL:0000163;2.61e-09;9!CL:0000235;1.72e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.40e-17,5;CL:0002028,9.40e-17,5;CL:0000163,2.30e-09,9;CL:0000235,2.67e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;6.93e-07;1 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.410502947249729,0.314843125254717,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.697204805222715,0.284338464974843,0.587200878669695,1.10799081706375,0.200544447470142,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,1.1384259382189,0.587237189370939,0.764546456250458,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,2.43806866313962,0,0.255725123687061,0.361439152384566,0,0,1.5905718941022,0,0,0.443458794925128,0.175669571386252,0.589405839739707,0,0,0,0,0,0.953962497221368,0,0.371457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0,0.258416759169329,1.06729878806013,1.67360306382335,0.805658634218294,0,0.488124115096339,0.735326160691737,0,0.17859945656816,0.22452937262617,0.563057402416611,0,0,0.732806975721629,0,0,0,0,0.506522046658319,0.132409180813219,0,0,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0,0,0,0.122834317311768,0,0,0.494533858557114,0.910161361938026,0,0,0.125118519871964,0.554128230968366,0,0.612975591598039,0.751190294532984,0.226864366320042,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.843881661206331,0.487185025805993,0,0.184099797284599,0,0.710019185033229,0.403008392910561,0.339121184620975,0,0.545492241181669,1.14721838155602,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,0,0,0,1.18157981336281,2.6487785964879,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0,0.925971025153221,0.380508304469197,0,0,0.492434012174795,3.04205544681009,0.743155811443641,0,0.335964256397719,0.141775097242386,0,0,0,1.97065295158377,0.704387472105808,1.03664057770386,1.44119953416961,1.2624243342638,0.761974731506028,0.763976851116555,0,1.71072446022705,0.205654985406647,0.600686115687835,0.571652865261156,0.112131084345361,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.199945982364114,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.591092280605782,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,1.66435439510497,0.907170879989041,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0.616122696835318,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.9273691048295,0.457847324091717,0.082509499920588,0,0,0,0.48335359146061,0,0.15350367472613,0.137836572484531,0.107420244868274,0.725083469571143,0.255679882248303,0.267096106940212,0.330569830721956,0.576570202095319,2.16941611240793,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.196498082026242,0.7133421029625,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,0.376575203107117,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,1.70740424036194,0.478278818186467,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0.677167111206413,0.321176150207399,0.201799707191048,0.425846237690326,0.687010689511529,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0.222886768554957,1.13654458722565,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0.222617410045812,0.329607748453519,0,0.796991953004279,0.552567831062295,0,0.102268682502155,0.492339221844278,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0.995213339381022,0.886642856860642,0,0,0,0.538651809526579,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.366390373607449,0,4.08773192782946,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.210998064528027,0,0.848118428603645,0,0,0.176915129006678,0.611030144933625,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0,0.394584402849391,0,0.61214552326098,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.174118413160805,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0.137041924646751,0,0,0,0,0.85381197895741,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0.209205692624666,0.203996435272644,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0,0.837847203816763,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0.254019996197353,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.121499113316049,0,0.86686278029118,0.681909645754975,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0,0.79318464064088,0.439656701034247,0,0.129282956361551,0.39669780522807,0,0,0.320362237703084,1.72924735609633,0,0.496166021811951,0.395223263795889,1.58330377895165,0,0,0.2506898940227,0.612691153526923,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.248385611765534,0.415045904808692,0,0.606596470166591,0.285465333544967,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.947015026375446,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0.181848659202559,0.322231671127465,0,0.398095888698616,0.400027764663154,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0.383683113910955,0.323474434190045,0.157265941855896,0,0,0,0.371807292777007,0,0,0.394308725006267,0,1.05802783107205,0.3062454773532,0.128458450192919,0,0,0.41023272848151,0.504143392443436,0,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.532214220975833,0.115233987555779,0.342976018874837,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.549451649953598,0.314231179832004,0.280272163313789,1.82631744101899,0.215927591218621,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0.31020638566432,0.955538938977433,0,0.588901401691458,1.09726132484042,0,0,0,0.971421986118279,0.701818390386317,0.198950775161368,0,0,0.219881033490858,0.452888530700021,0.463044948647668,0.218559560503957,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0,0.339854229375634,0.187967835959707,0.322289439867886,0.399764623699716,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0.952257725854961,0.839655827868079,0.372448285775147,0,0.25458863311266,0.202117188958219,0,0.342233301085281,0.606168477131288,0,0.332660356546013,0,0,0,1.70667884002515,0,1.22241444182866,2.03448089157869,0.665756774185513,0.805095174364105,0.641136984606466 | |||
|short_description=p6@LRCH1 | |||
}} |
Latest revision as of 14:12, 17 September 2015
Short description: | p6@LRCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000389797_5end |
EntrezGene: | LRCH1 |
HGNC: | 20309 |
UniProt: | F8W6F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.40e-17 | 5 |
basophil mast progenitor cell | 9.40e-17 | 5 |
endocrine cell | 2.30e-09 | 9 |
macrophage | 2.67e-08 | 6 |