FFCP PHASE1:Hg19::chr8:145011875..145011879,+: Difference between revisions
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|id=chr8:145011875..145011879,+
|short_description=p@chr8:145011875..145011879,+
|description=CAGE_peak_at_chr8:145011875..145011879,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:145011875..145011879,+ | |||
|description=CAGE_peak_at_chr8:145011875..145011879,+ | |||
|id=chr8:145011875..145011879,+ | |||
|ontology_enrichment_celltype=CL:0002588!4.14e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.53e-21;1!CL:0000342;4.22e-21;1!CL:0002565;4.22e-21;1!CL:0002588;3.02e-11;2!CL:0002166;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.53e-21,1;CL:0000342,6.31e-21,1;CL:0002565,6.31e-21,1;CL:0002588,3.02e-11,2;CL:0002166,5.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.02e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.56e-14!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;4.22e-21;1!UBERON:0001769;4.22e-21;1!UBERON:0001876;3.02e-11;2!UBERON:0001905;3.02e-11;2!UBERON:0001873;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0001899;3.02e-11;2!UBERON:0002420;8.83e-10;9!UBERON:0007245;8.83e-10;9!UBERON:0010009;8.83e-10;9!UBERON:0010011;8.83e-10;9!UBERON:0000454;8.83e-10;9!UBERON:0005383;6.34e-08;3!UBERON:0005382;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,6.31e-21,1;UBERON:0001769,6.31e-21,1;UBERON:0001876,2.02e-11,2;UBERON:0001873,2.47e-11,2;UBERON:0010122,2.47e-11,2;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0002420,6.78e-10,9;UBERON:0007245,6.78e-10,9;UBERON:0010009,6.78e-10,9;UBERON:0010011,6.78e-10,9;UBERON:0000454,6.78e-10,9;UBERON:0005383,5.54e-08,3;UBERON:0005382,5.54e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838634582033504,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,1.01150814046861,0.482022059766964,0.220587945464788,0.217879444092406,0.949082476444386,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0,0,0,0,0,0,0,0.695582429850461,0.821860859650752,0,0,0,0,0,0,0,0,0,1.84780341018745,0.992425680696705,0,0,0,0,0.176096868026452,0,0.144119953416961,0,2.15892840593375,0,0,0,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.946214490203608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65896526242959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,1.3754865741837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.482259445395058,0.412618309791701,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:145011875..145011879,+ | |||
}} | }} |
Latest revision as of 16:00, 31 July 2015
Short description: | p@chr8:145011875..145011879, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:145011875..145011879, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.53e-21 | 1 |
pigment cell (sensu Vertebrata) | 6.31e-21 | 1 |
iris pigment epithelial cell | 6.31e-21 | 1 |
smooth muscle cell of the umbilical vein | 3.02e-11 | 2 |
epithelial cell of Malassez | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 6.31e-21 | 1 |
iris | 6.31e-21 | 1 |
amygdala | 2.02e-11 | 2 |
caudate nucleus | 2.47e-11 | 2 |
future caudate nucleus | 2.47e-11 | 2 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
basal ganglion | 6.78e-10 | 9 |
nuclear complex of neuraxis | 6.78e-10 | 9 |
aggregate regional part of brain | 6.78e-10 | 9 |
collection of basal ganglia | 6.78e-10 | 9 |
cerebral subcortex | 6.78e-10 | 9 |
caudate-putamen | 5.54e-08 | 3 |
dorsal striatum | 5.54e-08 | 3 |