FFCP PHASE1:Hg19::chr8:15274691..15274710,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:15274691..15274710,+
|short_description=p2@TUSC3
|description=CAGE_peak_2_at_TUSC3_5end
|association_with_transcript=-13bp_to_ENST00000503191_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7991 | |EntrezGene=7991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30242 | |HGNC=30242 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000503191_5end | |||
|cluster_id=chr8:15274691..15274710,+ | |||
|description=CAGE_peak_2_at_TUSC3_5end | |||
|id=chr8:15274691..15274710,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.88e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.93e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.27e-12,19;CL:0000066,1.64e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;7.19e-07;30 | |||
|ontology_enrichment_disease=DOID:14566!5.74e-13!239;DOID:162!1.18e-12!235;DOID:120!5.22e-11!27;DOID:193!1.03e-09!29;DOID:305!8.05e-09!106;DOID:2394!1.25e-08!14;DOID:0050686!2.48e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:120;5.19e-13;27!DOID:193;7.93e-12;29!DOID:2394;1.68e-10;14!DOID:0050615;1.69e-08;16!DOID:1324;3.11e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.09e-18,235;DOID:14566,1.75e-17,239;DOID:120,6.82e-13,27;DOID:0050686,5.80e-12,137;DOID:193,1.02e-11,29;DOID:305,9.55e-11,106;DOID:2394,2.20e-10,14;DOID:0050615,1.95e-08,16;DOID:0050687,2.43e-08,143;DOID:1324,3.64e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000955!2.68e-11!69;UBERON:0006238!2.68e-11!69;UBERON:0001017!3.06e-10!82;UBERON:0005743!1.08e-09!86;UBERON:0002616!1.25e-08!59;UBERON:0000073!2.57e-08!94;UBERON:0001016!2.57e-08!94;UBERON:0003080!2.91e-08!42;UBERON:0000475!4.95e-08!365;UBERON:0002780!7.31e-08!41;UBERON:0001890!7.31e-08!41;UBERON:0006240!7.31e-08!41;UBERON:0001049!7.41e-08!57;UBERON:0005068!7.41e-08!57;UBERON:0006241!7.41e-08!57;UBERON:0007135!7.41e-08!57;UBERON:0003056!8.10e-08!61;UBERON:0000033!2.50e-07!123;UBERON:0001869!3.50e-07!32;UBERON:0000481!3.77e-07!347;UBERON:0001893!6.26e-07!34;UBERON:0003075!6.62e-07!86;UBERON:0007284!6.62e-07!86;UBERON:0002020!7.17e-07!34;UBERON:0003528!7.17e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;6.07e-10;7!UBERON:0000369;7.51e-09;4!UBERON:0002435;7.51e-09;4!UBERON:0000204;7.51e-09;4!UBERON:0002118;1.22e-08;5!UBERON:0002420;1.59e-07;9!UBERON:0000125;1.59e-07;9!UBERON:0007245;1.59e-07;9!UBERON:0002308;1.59e-07;9!UBERON:0010009;1.59e-07;9!UBERON:0010011;1.59e-07;9!UBERON:0000454;1.59e-07;9!UBERON:0005383;3.73e-07;3!UBERON:0005382;3.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,6.93e-10,7;UBERON:0000369,6.84e-09,4;UBERON:0002435,6.84e-09,4;UBERON:0000204,6.84e-09,4;UBERON:0010082,6.84e-09,4;UBERON:0002118,1.77e-08,5;UBERON:0002420,1.76e-07,9;UBERON:0000125,1.76e-07,9;UBERON:0007245,1.76e-07,9;UBERON:0002308,1.76e-07,9;UBERON:0010009,1.76e-07,9;UBERON:0010011,1.76e-07,9;UBERON:0000454,1.76e-07,9;UBERON:0005383,3.67e-07,3;UBERON:0005382,3.67e-07,3 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55244006342983,0.221729397462564,0.87834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,1.65857688024593,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.579652024875384,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,2.1798003441664,3.2268845761218,2.84397774667111,0,0.845302752556,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,3.91871190177462,2.61460037580088,2.59929777073348,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.60818530127658,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0.256278298511402,1.02341449813341,0,0,0.308419387605311,0.177561725313127,0.328508624055237,1.55776328755086,0.232420756919918,0.362578348774867,0,0,2.06666006696292,3.45973219212762,6.03172308813351,3.15839729035188,13.3236533190638,0.784349769176855,0,9.81630148703744,0,0,0.215915916102139,0,2.16757150035082,1.50506932156456,1.01950509218015,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.689182862422653,0.966782203814463,0.290033387828457,0.511359764496605,1.51354460599453,0.165284915360978,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,4.46590043231601,0.632758849437452,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,1.06031162111118,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,5.3908847515827,0.185803175125719,0,1.56512055366511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56812347790485,4.92349595790849,14.0636952807511,0,0,0,0,0,0,0,0,0,0,0,0,2.56010021552684,0,0,0,0,0,0.20453736500431,1.47701766553283,0,0.808815160325942,105.980535407961,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,3.52759689685049,9.66163871112512,0.236387681767936,0,0,0,20.3720518737183,6.39161124714662,0,0.110579259931225,0,0.219385397153973,0.435753854075961,0,0,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0,0,0,0.784250137270958,0.839107934879214,7.02088811079485,0.317873157960757,24.6867735497792,2.12202650606892,0,0.865554558968364,0,0,0,0,0,0,0.067401132980677,0,6.5594044803095,0,0.391329237864179,0,0,0,0,0.63186579628488,0,0.207376382794494,2.65861549082874,1.323967823502,0,0,5.69219092059585,0.693373365065693,0,0.587954384486266,0.34823682632161,0.17472666824203,0,0.580537987734511,0.219267951258557,0.492692742319255,0,0,0,1.64450309576101,4.96786529257474,0.316553979779393,0,34.7889279891656,0,5.39485945871752,0,0,0,0.14405479798815,3.23056592470125,0,9.24148601300575,8.36822770498666,17.6456916510837,1.44475294950759,5.4037825983881,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.202210631562555,27.7565497871592,6.68919323319697,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.789744236554321,0,0,0.419636705079985,0.422401346077626,28.6859742932552,1.15149118391667,0,0,0,0.542999601753713,0,0,4.7892076624995,0.164185041498678,0.851940108927109,0.679872549120754,0,0,0.258565912723101,0.13223260174269,5.30369197441421,9.16259529011673,0,0,0,0,0.988058159489721,0,0,0,0,0,0,5.9680556575089,0.886068179966986,1.46431517882356,0.625954653532499,0.573409195690071,0.110929051536852,0.18628920882415,0,1.49976489554528,0,0,1.41159491818903,0,0,0.74627401443437,0.934853239388898,1.66441758450784,0.189403005275089,0,0,5.94984177832001,0.604923695052956,0.932623203496683,0.295710299979268,1.43367090447332,4.04822800947244,0.931577741257556,0.829412415681711,3.98762571836992,1.5652351854352,0.150257608997218,1.14241563650639,2.03435366602331,1.09109195521536,1.50374779859484,7.88857391793439,1.19428766609585,0.400027764663154,0,0.336749488765919,0,0.385239660814607,0,0,7.02788369088044,0.231522474323834,0.734210113519403,1.61179956973339,0,0,2.29695889729645,2.31496845925098,15.3737620994296,13.8370420037491,8.98118888501116,25.2203763627227,0.553033744606923,0,0,0.163565394255844,0,35.6370717692893,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,5.97331793397074,0,0.159633859057151,0.61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| ||
|short_description=p2@TUSC3 | |||
}} | }} |
Latest revision as of 03:10, 17 September 2015
Short description: | p2@TUSC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUSC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000503191_5end |
EntrezGene: | TUSC3 |
HGNC: | 30242 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.27e-12 | 19 |
epithelial cell | 1.64e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 6.93e-10 | 7 |
corpus striatum | 6.84e-09 | 4 |
striatum | 6.84e-09 | 4 |
ventral part of telencephalon | 6.84e-09 | 4 |
future corpus striatum | 6.84e-09 | 4 |
right ovary | 1.77e-08 | 5 |
basal ganglion | 1.76e-07 | 9 |
neural nucleus | 1.76e-07 | 9 |
nuclear complex of neuraxis | 1.76e-07 | 9 |
nucleus of brain | 1.76e-07 | 9 |
aggregate regional part of brain | 1.76e-07 | 9 |
collection of basal ganglia | 1.76e-07 | 9 |
cerebral subcortex | 1.76e-07 | 9 |
caudate-putamen | 3.67e-07 | 3 |
dorsal striatum | 3.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.09e-18 | 235 |
disease of cellular proliferation | 1.75e-17 | 239 |
female reproductive organ cancer | 6.82e-13 | 27 |
organ system cancer | 5.80e-12 | 137 |
reproductive organ cancer | 1.02e-11 | 29 |
carcinoma | 9.55e-11 | 106 |
ovarian cancer | 2.20e-10 | 14 |
respiratory system cancer | 1.95e-08 | 16 |
cell type cancer | 2.43e-08 | 143 |
lung cancer | 3.64e-07 | 15 |