FFCP PHASE1:Hg19::chr15:65477785..65477794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2088 | |||
|TSSclassifier=strong | |||
|UniProt=O76031 | |||
|association_with_transcript=-105bp_to_ENST00000300107,ENST00000558958_5end | |||
|cluster_id=chr15:65477785..65477794,- | |||
|description=CAGE_peak_2_at_CLPX_5end | |||
|id=chr15:65477785..65477794,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.93e-17;2!CL:0000558;5.93e-17;2!CL:0002336;2.44e-09;1!CL:0002261;2.44e-09;1!CL:0002170;2.44e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.08e-17,2;CL:0000765,5.08e-17,2;CL:0000050,5.08e-17,2;CL:0000038,5.08e-17,2;CL:0000558,5.08e-17,2;CL:0000547,5.08e-17,2;CL:0000549,5.08e-17,2;CL:0000550,5.08e-17,2;CL:0000552,5.08e-17,2;CL:0002336,4.87e-09,1;CL:0002261,4.87e-09,1;CL:0002170,4.87e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.28e-11;3!UBERON:0003057;1.28e-11;3!UBERON:0006222;2.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.83e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.28e-11;3!UBERON:0005174;1.28e-11;3!UBERON:0001137;1.28e-11;3!UBERON:0002336;2.44e-09;1!UBERON:0011215;2.44e-09;1!UBERON:0001018;2.44e-09;1!UBERON:0002473;2.44e-09;1!UBERON:0005340;2.44e-09;1!UBERON:0003544;2.44e-09;1!UBERON:0005970;2.44e-09;1!UBERON:0002316;2.44e-09;1!UBERON:0001020;2.44e-09;1!UBERON:0002437;2.44e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.29e-11,3;UBERON:0005174,1.29e-11,3;UBERON:0001137,1.29e-11,3;UBERON:0002336,1.99e-09,1;UBERON:0011215,1.99e-09,1;UBERON:0001018,1.99e-09,1;UBERON:0002473,1.99e-09,1;UBERON:0005340,1.99e-09,1;UBERON:0003544,1.99e-09,1;UBERON:0005970,1.99e-09,1;UBERON:0002316,1.99e-09,1;UBERON:0001020,1.99e-09,1;UBERON:0002437,1.99e-09,1;UBERON:0001016,1.03e-08,89;UBERON:0001017,4.24e-08,81 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.30120591877825,2.58827807116751,0.309868802321207,0.142169232487422,0,0,0.601633342410425,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0.294605907474837,0,0.812411591295047,0.384273959177026,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0.472674085820339,0,0.175669571386252,0.392937226493138,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,1.17434498643765,0.323745888736263,0.280901613404497,0,0.245668634623536,0,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0.211931901159562,0,0.412210116953756,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0.219500570817251,0,0,1.01847289674383,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0.447792613514241,0.290633938513962,0.383382679165211,0,0.088048434013226,0.621984346622316,0,0.12624243342638,0.253991577168676,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,3.16780749173372,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0.232420756919918,0.362578348774867,0.200506470303285,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0.223874754722178,1.09629938322967,1.5686127061494,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.15350367472613,1.65403886981437,0.537101224341368,1.0151168573996,0.767039646744908,0,0.165284915360978,0.192190067365106,0.510450849978337,0.30347334256665,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,1.116475108079,0,0.190630193923825,0,0,0,0,0,0,0.589062011728432,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0.459446800413919,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,0,0.245040215981032,0,0.432807638929335,0.142283686696828,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0.321176150207399,0,0.851692475380653,0.687010689511529,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0.242721043499027,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0.20453736500431,0.615424027305347,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,1.20598527610407,0,0.520855522170466,0.437299999980979,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0.291604613383254,0.520874984799877,0,0.361789315876224,0,0.221158519862449,0.295547618953547,1.31631238292384,0,0.139423744278603,0.153900517007594,0,0,0.269272933229316,0.217294743844016,0.638002319463839,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0.588187602953219,0.335643173951685,0.37950746544837,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.208843899010911,1.28062152663286,0,1.40558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| |||
|short_description=p2@CLPX | |||
}} |
Latest revision as of 14:52, 18 September 2015
Short description: | p2@CLPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLPX_5end |
Coexpression cluster: | NA |
Association with transcript: | -105bp_to_ENST00000300107, ENST00000558958_5end |
EntrezGene: | CLPX |
HGNC: | 2088 |
UniProt: | O76031 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.08e-17 | 2 |
erythroblast | 5.08e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 5.08e-17 | 2 |
erythroid progenitor cell | 5.08e-17 | 2 |
reticulocyte | 5.08e-17 | 2 |
proerythroblast | 5.08e-17 | 2 |
basophilic erythroblast | 5.08e-17 | 2 |
polychromatophilic erythroblast | 5.08e-17 | 2 |
orthochromatic erythroblast | 5.08e-17 | 2 |
buccal mucosa cell | 4.87e-09 | 1 |
endothelial cell of viscerocranial mucosa | 4.87e-09 | 1 |
keratinized cell of the oral mucosa | 4.87e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.29e-11 | 3 |
dorsal region element | 1.29e-11 | 3 |
dorsum | 1.29e-11 | 3 |
corpus callosum | 1.99e-09 | 1 |
central nervous system cell part cluster | 1.99e-09 | 1 |
axon tract | 1.99e-09 | 1 |
intercerebral commissure | 1.99e-09 | 1 |
dorsal telencephalic commissure | 1.99e-09 | 1 |
brain white matter | 1.99e-09 | 1 |
brain commissure | 1.99e-09 | 1 |
white matter | 1.99e-09 | 1 |
nervous system commissure | 1.99e-09 | 1 |
cerebral hemisphere white matter | 1.99e-09 | 1 |
nervous system | 1.03e-08 | 89 |
central nervous system | 4.24e-08 | 81 |