FFCP PHASE1:Hg19::chr15:68653998..68654015,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:68653998..68654015,- | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr15:68653998..68654015,- | |||
|id=chr15:68653998..68654015,- | |||
|ontology_enrichment_celltype=CL:0000055!2.88e-26!180;CL:0000057!3.84e-25!75;CL:0002620!1.60e-10!23;CL:0000048!9.99e-09!430;CL:0000723!3.54e-08!436;CL:0000034!1.75e-07!444;CL:0002334!2.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.18e-11;23!CL:0002334;1.73e-10;12!CL:0000057;9.38e-10;73!CL:0000136;2.16e-09;13!CL:0002579;3.90e-09;3!CL:0002615;4.06e-09;3!CL:0002580;7.06e-09;3!CL:0000327;4.70e-07;15!CL:0000197;8.03e-07;6!CL:0000098;8.03e-07;6!CL:0002167;8.03e-07;6!CL:0000153;8.74e-07;9!CL:0000447;8.74e-07;9!CL:0002320;9.31e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.63e-22,76;CL:0000136,4.13e-13,15;CL:0000134,1.45e-12,354;CL:0002320,4.93e-12,361;CL:0000048,1.71e-11,427;CL:0000723,4.12e-11,433;CL:0002620,7.14e-11,23;CL:0000219,8.19e-11,386;CL:0000034,1.28e-10,441;CL:0002334,1.61e-10,12;CL:0002579,3.61e-09,3;CL:0002615,3.71e-09,3;CL:0002580,6.81e-09,3;CL:0000327,4.19e-07,15;CL:0000197,7.20e-07,6;CL:0000098,7.20e-07,6;CL:0002167,7.20e-07,6;CL:0000153,9.17e-07,9;CL:0000447,9.17e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.48e-08;5!DOID:450;5.48e-08;5!DOID:66;5.48e-08;5!DOID:423;5.48e-08;5!DOID:0080000;5.48e-08;5!DOID:11722;5.48e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.22e-08,5;DOID:450,6.22e-08,5;DOID:66,6.22e-08,5;DOID:423,6.22e-08,5;DOID:0080000,6.22e-08,5;DOID:11722,6.22e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.65e-08!6;UBERON:0002358!1.65e-08!6;UBERON:0003684!1.65e-08!6;UBERON:0001178!1.65e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.12e-18;9!UBERON:0000042;2.12e-18;9!UBERON:0003688;1.48e-16;6!UBERON:0002358;1.48e-16;6!UBERON:0003684;1.48e-16;6!UBERON:0001178;1.48e-16;6!UBERON:0002384;2.71e-07;198!UBERON:0005406;9.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.26e-16,6;UBERON:0002358,1.26e-16,6;UBERON:0003684,1.26e-16,6;UBERON:0001178,1.26e-16,6;UBERON:0004457,1.94e-13,12;UBERON:0000042,1.94e-13,12;UBERON:0002384,4.74e-12,371;UBERON:0002199,1.92e-07,46;UBERON:0002416,1.92e-07,46;UBERON:0002097,2.05e-07,41 | |||
|phase1_expression=2.18014055124668,10.0627246228762,2.67813367782345,37.0271203906583,14.3027550216732,5.23403114460221,2.53299878168311,0,0,0,0,0,0,0,0,3.36162573225888,0.602694528023977,1.46062018077475,0,0.123121058076788,0.408001382488506,2.19418305034661,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,2.75208386025565,0,4.86634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,0.759783069987479,0.132409180813219,5.16305917347865,0.709336764396714,4.48542080113846,0,10.6067045819379,0.622422070799533,0.67355336034844,0.490385709340376,0.605429710579726,2.30470369792,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,2.71993622206413,0,0,0,0,0,0.877955241761676,4.29082914118628,2.10333282469236,0.113432183160021,1.07633781413317,2.34913127700424,0.847727604638247,3.00091096084402,1.64884046781502,3.60696756063881,2.41951913231067,1.68776332241266,4.96928726322113,0.757301322732344,1.84099797284599,0.969876340912871,6.39017266529906,2.11579406278045,0.169560592310488,0,0,0,0,0,0,0,0,0,0,5.78916844373597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,1.32969058292435,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,2.39624855491583,3.44585807502342,0,0.723906533337896,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,3.21172179834891,2.68094105557689,1.99140405487612,0.601892199455438,25.0148254461583,1.03473071292505,1.32845119707087,2.02806085395873,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0.30239029332968,2.48107807818777,4.60385919864187,24.1367681212443,3.45975702990393,8.18731598506726,6.91671860917512,8.90508398669946,0,0.532685175939381,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.623224249527161,0,0,0,0,0,2.83331112147576,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.949138274156178,0,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,1.68503382495592,0,0,0,0,1.1312434556297,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,5.69990615303693,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,2.98871982376605,0.276283915531148,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,1.25336261431701,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0.104602846312333,0.305994652908965,0.288950589901519,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0.511164065356265,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0,1.63599316893057,0,0.947015026375446,2.76724691927833,0,0.228840068396924,0.756154618816195,0.15543720058278,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.797525143673985,1.04349012362347,0.751288044986092,0.380805212168795,0.813741466409323,0.545545977607678,0.322231671127465,0,0.796191777397232,3.20022211730523,5.49433128292469,2.69399591012735,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,5.2417575815426,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0.954013051960256,0,0,1.05802783107205,4.2874366829448,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,6.10211352747467,0,0,0.150420656698515,0.20170506870352,0,0,0.49131575253029,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,4.83593523616777,6.47045880083986,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr15:68653998..68654015,- | |||
}} |
Latest revision as of 03:43, 25 July 2015
Short description: | p@chr15:68653998..68654015, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68653998..68654015, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.63e-22 | 76 |
fat cell | 4.13e-13 | 15 |
mesenchymal cell | 1.45e-12 | 354 |
connective tissue cell | 4.93e-12 | 361 |
multi fate stem cell | 1.71e-11 | 427 |
somatic stem cell | 4.12e-11 | 433 |
skin fibroblast | 7.14e-11 | 23 |
motile cell | 8.19e-11 | 386 |
stem cell | 1.28e-10 | 441 |
preadipocyte | 1.61e-10 | 12 |
omentum preadipocyte | 3.61e-09 | 3 |
adipocyte of omentum tissue | 3.71e-09 | 3 |
preadipocyte of the breast | 6.81e-09 | 3 |
extracellular matrix secreting cell | 4.19e-07 | 15 |
receptor cell | 7.20e-07 | 6 |
sensory epithelial cell | 7.20e-07 | 6 |
olfactory epithelial cell | 7.20e-07 | 6 |
GAG secreting cell | 9.17e-07 | 9 |
carbohydrate secreting cell | 9.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.26e-16 | 6 |
peritoneum | 1.26e-16 | 6 |
abdominal cavity | 1.26e-16 | 6 |
visceral peritoneum | 1.26e-16 | 6 |
cavity lining | 1.94e-13 | 12 |
serous membrane | 1.94e-13 | 12 |
connective tissue | 4.74e-12 | 371 |
integument | 1.92e-07 | 46 |
integumental system | 1.92e-07 | 46 |
skin of body | 2.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.22e-08 | 5 |
myotonic disease | 6.22e-08 | 5 |
muscle tissue disease | 6.22e-08 | 5 |
myopathy | 6.22e-08 | 5 |
muscular disease | 6.22e-08 | 5 |
myotonic dystrophy | 6.22e-08 | 5 |