FFCP PHASE1:Hg19::chr16:19728636..19728681,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28556 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-335bp_to_uc010bwc.2,uc010vat.1,uc010vau.1_5end | |||
|cluster_id=chr16:19728636..19728681,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_IQCK_5end | |||
|id=chr16:19728636..19728681,+ | |||
|ontology_enrichment_celltype=CL:0000213!6.93e-19!57;CL:0000215!6.93e-19!57;CL:0000077!3.53e-17!19;CL:0005020!1.18e-11!6;CL:0002138!1.18e-11!6;CL:0005022!1.18e-11!6;CL:0000076!4.90e-11!62;CL:0002139!1.23e-10!24;CL:0000222!1.53e-09!119;CL:0000115!1.90e-07!35;CL:0002078!2.99e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002144;6.43e-23;3!CL:0000077;3.22e-14;19!CL:0002139;8.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,6.44e-23,3;CL:0000077,2.81e-14,19;CL:0000213,1.34e-13,58;CL:0000215,1.34e-13,58;CL:0000076,2.89e-09,63;CL:0002139,8.26e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.66e-18;1!DOID:4549;2.66e-18;1!DOID:5861;2.66e-18;1!DOID:6496;2.66e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.66e-18,1;DOID:4549,2.66e-18,1;DOID:5861,2.66e-18,1;DOID:6496,2.66e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0001473!1.76e-08!8;UBERON:0004536!1.76e-08!8;UBERON:0006558!1.76e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;6.43e-23;3!UBERON:0001915;6.43e-23;3!UBERON:0001982;6.43e-23;3!UBERON:0002418;5.80e-07;3!UBERON:0004755;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.44e-23,3;UBERON:0001915,6.44e-23,3;UBERON:0001982,6.44e-23,3;UBERON:0002418,5.80e-07,3;UBERON:0004755,5.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,1.67360306382335,1.61131726843659,0,1.46437234528902,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0,0,0.504641701751257,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,6.88397788193702,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0.249960815924213,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0.770479321629213,0.643324774124777,1.56596575179127,0.453411851024545,0.694567422971502,0,0.179088841081487,0.308801447160972,1.75427239662966,0.353378291891762,0,1.01365464391844,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,1.531227386766,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.335566295393377,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.327796715891087,0,0.203977659483963,0.26721740526556,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@IQCK | |||
}} |
Latest revision as of 00:13, 25 September 2015
Short description: | p5@IQCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IQCK_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -335bp_to_uc010bwc.2, uc010vat.1, uc010vau.1_5end |
EntrezGene: | IQCK |
HGNC: | 28556 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 6.44e-23 | 3 |
mesothelial cell | 2.81e-14 | 19 |
lining cell | 1.34e-13 | 58 |
barrier cell | 1.34e-13 | 58 |
squamous epithelial cell | 2.89e-09 | 63 |
endothelial cell of vascular tree | 8.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.44e-23 | 3 |
endothelium of capillary | 6.44e-23 | 3 |
capillary | 6.44e-23 | 3 |
cartilage tissue | 5.80e-07 | 3 |
skeletal tissue | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.66e-18 | 1 |
extraosseous chondrosarcoma | 2.66e-18 | 1 |
myxoid chondrosarcoma | 2.66e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 2.66e-18 | 1 |