FFCP PHASE1:Hg19::chr17:46621146..46621180,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5113 | |||
|TSSclassifier=strong | |||
|UniProt=P14652 | |||
|association_with_transcript=-72bp_to_X14571_5end | |||
|cluster_id=chr17:46621146..46621180,- | |||
|description=CAGE_peak_10_at_HOXB2_5end | |||
|id=chr17:46621146..46621180,- | |||
|ontology_enrichment_celltype=CL:0000183!3.77e-10!59;CL:0000680!8.67e-10!57;CL:0000056!8.67e-10!57;CL:0000355!8.67e-10!57;CL:0000055!1.30e-09!180;CL:0000187!1.32e-08!54;CL:0000192!1.26e-07!42;CL:0000514!1.26e-07!42;CL:0000003!6.70e-07!722;CL:0002334!7.31e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.15e-07;12!CL:0002570;1.31e-07;8!CL:0002539;2.22e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.62e-08,12;CL:0002570,7.29e-08,8;CL:0000680,9.01e-08,58;CL:0000056,9.01e-08,58;CL:0000355,9.01e-08,58;CL:0002539,3.12e-07,10;CL:0000187,8.44e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.93e-08!70;UBERON:0002385!4.20e-08!63;UBERON:0001015!4.20e-08!63;UBERON:0000383!4.20e-08!63;UBERON:0001134!4.28e-08!61;UBERON:0002036!4.28e-08!61;UBERON:0003082!4.28e-08!61;UBERON:0000914!5.44e-07!83;UBERON:0002329!5.44e-07!83;UBERON:0003077!5.44e-07!83;UBERON:0003059!5.44e-07!83;UBERON:0007282!5.44e-07!83;UBERON:0009618!5.44e-07!83;UBERON:0007285!5.44e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;2.22e-07;10!UBERON:0004695;2.22e-07;10!UBERON:0002111;2.22e-07;10!UBERON:0004178;2.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,3.12e-07,10;UBERON:0004695,3.12e-07,10;UBERON:0002111,3.12e-07,10;UBERON:0004178,3.12e-07,10;UBERON:0007503,5.08e-07,78;UBERON:0001134,7.64e-07,62;UBERON:0002036,7.64e-07,62;UBERON:0003082,7.64e-07,62 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.845726424575827,0,0,0,0,0,0.783556884599516,0,0.697801167972428,1.52908960491121,0.527533956456907,1.23766352960047,0.994192127183747,1.34465029290355,3.01347264011988,2.92124036154949,4.39139518911456,0.861847406537515,2.65200898617529,4.07491137921514,0,2.73748850145768,0.627713197974014,0.993374274723366,1.14940825229924,0.944529375764151,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,2.73069305631066,1.77901850772711,0.426730222566507,0.400395987036012,0,1.98313461835459,0,0,0,0,0,0,0,1.7703879310245,1.96505381374582,0.616804496998528,5.51715434789238,1.30368906653436,5.20792586308207,0,3.11949279278486,3.82987679717288,4.43067789167242,3.79125409271022,4.22701355094728,5.07231455483525,8.38633313478748,7.18510046243206,2.31842468588042,1.03800594213442,1.07016331235885,1.04535523804977,2.49280553934646,1.91610246800961,2.40539211837841,0.759059076058509,2.86708872891687,0,0,0.602300476311091,1.4078527226986,0,1.89421801635213,2.46338399076314,0.604820229674197,0.267440195783507,1.30341963494519,0,1.34140171940727,0,0,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0.715471872916026,0,1.11437250398869,0,0,0,0,1.25849830862972,0.825354125820202,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0.625098097988558,0,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0,0.506522046658319,2.91300197789081,0.573673241497627,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,0.151357427644931,0,0.468642863667593,0,0,0.747243402759005,0.704606991862589,0.647491777472526,0.702254033511242,0.204154171254893,0,0,0,0,0,5.03032699271367,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0.423863802319124,0.300091096084402,0.515262646192195,0,0.37223371266318,1.0126579934476,0.779496041289589,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0.929551542956147,0.414644220061482,0.504641701751257,0,1.56449532329816,1.28648187638577,0,0,0.721879481669586,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,3.2925920906512,1.47008711385542,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0.288732895522148,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0.708875486211932,0.447792613514241,0.290633938513962,1.53353071666084,12.3165809473986,2.11316241631742,0.414656231081544,0.576479813667846,0.6312121671319,0,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0.22001485746285,1.68053230485111,0,2.535908257668,0,0,0.514414748524284,4.25547396069835,0.266422179016099,0.857867961948885,0,0,1.62868092146868,0.355391948742546,0,0.301439377059586,1.74306691720059,1.79951384127703,0,0,0,0,0,0,2.60606352001643,0.821905290201534,2.86497541183833,1.2329365839288,0.394061520403854,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,0,0.981531933753119,3.50119364741774,5.15403545029498,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0,0.979005787313703,1.02943027143257,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0.907170879989041,0.496215615637554,1.99500565274481,1.96462066103151,1.02511319404561,0.511707249066704,0.482561763430822,1.48418066444991,4.00945203886904,8.34540108971697,2.79232330446951,5.71179872101983,3.1376802184189,0,0,0,0.229628896329213,0.910455840033585,0.917870904715969,1.80479845162965,0.539107359730903,1.56869953835371,1.46139224653261,0.527758144464379,0,0.340187410553031,0.215915916102139,1.54227252690289,1.62567862526312,5.51858751240339,2.29388645740534,0.831076008928724,0.671624264166535,1.09629938322967,1.3071772551245,0,0,0,0.206082023295445,0.27470839445503,0.247528499761764,1.14853107599234,0,0,1.06337790121334,1.3864375540318,1.22802939780904,1.65403886981437,0.214840489736547,0.290033387828457,1.27839941124151,1.06838442776085,0,0,0,0,1.39453664789186,0.31481234683064,2.0911118104818,0.308033580176089,1.06461206063404,2.60979897622522,0.37064843820784,0,0,0.949138274156178,1.5250415513906,5.11795582622668,0.855877976067841,0,0,0.359744915166629,0.823611089208164,0.824686816419805,1.61745985258653,0,1.26377536871694,1.46290121726877,1.94970791705028,1.05650146756755,0,0.282810863907425,2.26016233240486,0.551365343546124,0.66343897524122,0.876901770507525,3.47265320560013,1.31178950409327,0.405820753925408,0.30982349809975,0.563391205064483,0.573645408816206,0.0982490410131212,0,0.709522128141196,0,0,0.379473173765715,2.0996083214699,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,1.13929437434833,1.19115887728894,1.23408681925858,0.648473311192717,0,1.5862503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| |||
|short_description=p10@HOXB2 | |||
}} |
Latest revision as of 06:35, 25 September 2015
Short description: | p10@HOXB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_X14571_5end |
EntrezGene: | HOXB2 |
HGNC: | 5113 |
UniProt: | P14652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.62e-08 | 12 |
mesenchymal stem cell of adipose | 7.29e-08 | 8 |
muscle precursor cell | 9.01e-08 | 58 |
myoblast | 9.01e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.01e-08 | 58 |
aortic smooth muscle cell | 3.12e-07 | 10 |
muscle cell | 8.44e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.12e-07 | 10 |
arterial system smooth muscle | 3.12e-07 | 10 |
artery smooth muscle tissue | 3.12e-07 | 10 |
aorta smooth muscle tissue | 3.12e-07 | 10 |
epithelial vesicle | 5.08e-07 | 78 |
skeletal muscle tissue | 7.64e-07 | 62 |
striated muscle tissue | 7.64e-07 | 62 |
myotome | 7.64e-07 | 62 |