FFCP PHASE1:Hg19::chr19:1745868..1745888,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:1745868..1745888,- | |||
|description=CAGE_peak_at_chr19:1745868..1745888,- | |||
|id=chr19:1745868..1745888,- | |||
|ontology_enrichment_celltype=CL:0002076!3.32e-09!43;CL:0000220!5.63e-08!246;CL:0002321!7.79e-08!248;CL:0002368!2.65e-07!13;CL:0000066!5.20e-07!254;CL:0000223!7.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000307;8.22e-17;3!CL:0002178;1.61e-16;3!CL:0002202;1.84e-12;9!CL:0002632;1.84e-12;9!CL:0002368;8.53e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,9.26e-17,3;CL:0000069,9.26e-17,3;CL:0000307,9.26e-17,3;CL:0000377,9.26e-17,3;CL:0002178,1.27e-16,3;CL:0002202,1.84e-12,9;CL:0002632,1.84e-12,9;CL:0002076,1.01e-09,42;CL:0002368,8.53e-09,13;CL:0000223,6.23e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;8.22e-17;3!CL:0000223;7.37e-07;58 | |||
|ontology_enrichment_disease=DOID:3493!4.89e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.74e-24;2!DOID:6193;1.61e-13;1!DOID:3350;2.15e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.15e-24,2;DOID:6193,1.61e-13,1;DOID:3350,2.15e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.71e-10;5!UBERON:0010039;2.71e-10;5!UBERON:0003126;1.00e-07;7!UBERON:0001005;1.00e-07;7!UBERON:0007196;1.09e-07;15!UBERON:0001558;1.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.06e-07,7;UBERON:0001005,1.06e-07,7;UBERON:0007196,1.09e-07,15;UBERON:0001558,1.09e-07,15;UBERON:0000945,8.60e-07,8;UBERON:0010039,8.60e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.860509862246441,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.661139661443912,0,0.510450849978337,0,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,3.75266239629497,2.01090682660736,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,0,9.97518988335376,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,2.4495370916198,0,0,0,0.124252535565433,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37280437475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,8.61606447330671,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,1.00108261702862,0,0,0,0,0.431855182437243,0,0,0,4.64965701472501,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0.111855431797792,1.86485443868962,7.92466512384751,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0.404234377916439,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:1745868..1745888,- | |||
}} |
Latest revision as of 04:52, 26 July 2015
Short description: | p@chr19:1745868..1745888, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1745868..1745888, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 9.26e-17 | 3 |
branched duct epithelial cell | 9.26e-17 | 3 |
tracheal epithelial cell | 9.26e-17 | 3 |
tracheoblast | 9.26e-17 | 3 |
epithelial cell of stomach | 1.27e-16 | 3 |
epithelial cell of tracheobronchial tree | 1.84e-12 | 9 |
epithelial cell of lower respiratory tract | 1.84e-12 | 9 |
endo-epithelial cell | 1.01e-09 | 42 |
respiratory epithelial cell | 8.53e-09 | 13 |
endodermal cell | 6.23e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.06e-07 | 7 |
respiratory airway | 1.06e-07 | 7 |
tracheobronchial tree | 1.09e-07 | 15 |
lower respiratory tract | 1.09e-07 | 15 |
stomach | 8.60e-07 | 8 |
food storage organ | 8.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.15e-24 | 2 |
epithelioid sarcoma | 1.61e-13 | 1 |
mesenchymal cell neoplasm | 2.15e-07 | 2 |