FFCP PHASE1:Hg19::chr19:43422019..43422057,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9523 | |||
|TSSclassifier=strong | |||
|UniProt=B5MC00,B5MCE1,Q00889 | |||
|association_with_transcript=0bp_to_ENST00000402456,ENST00000402603,NM_001031850,uc002ovf.1,uc002ovg.1,uc002ovj.1_5end | |||
|cluster_id=chr19:43422019..43422057,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG6_5end | |||
|id=chr19:43422019..43422057,- | |||
|ontology_enrichment_celltype=CL:0002620!1.28e-14!23;CL:0000057!1.40e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0002621;6.21e-10;3!CL:0000077;5.01e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.12e-10,3;CL:0000077,4.85e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.79e-09;1 | |||
|ontology_enrichment_disease=DOID:17!1.14e-09!5;DOID:450!1.14e-09!5;DOID:66!1.14e-09!5;DOID:423!1.14e-09!5;DOID:0080000!1.14e-09!5;DOID:11722!1.14e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.82e-10;3!DOID:6193;2.09e-08;1!DOID:3112;2.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.87e-10,3;DOID:6193,2.17e-08,1;DOID:3112,2.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.27e-13!40;UBERON:0002199!6.00e-12!45;UBERON:0002416!6.00e-12!45;UBERON:0000060!1.05e-07!12;UBERON:0003124!4.66e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.21e-10;3!UBERON:0004913;4.56e-08;1!UBERON:0003703;4.56e-08;1!UBERON:0001174;4.56e-08;1!UBERON:0004914;4.56e-08;1!UBERON:0001987;5.54e-08;4!UBERON:0004807;1.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.12e-10,3;UBERON:0003124,9.57e-10,7;UBERON:0005631,3.56e-08,14;UBERON:0000158,3.56e-08,14;UBERON:0004913,4.72e-08,1;UBERON:0003703,4.72e-08,1;UBERON:0001174,4.72e-08,1;UBERON:0004914,4.72e-08,1;UBERON:0001987,4.90e-08,4;UBERON:0004340,4.90e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.640672166455702,1.05965950579781,1.80054657650641,0.618315175430633,0.257640540045629,0.37223371266318,1.18143432568886,0.779496041289589,0.757301322732344,0.920498986422993,0.323292113637624,1.77504796258307,0.906768884048762,0.339121184620975,1.93260853163297,1.63647672354501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19166043577833,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.315404830067869,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.640695746278505,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,701.606248309341,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0.94443704049192,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,670.962868136105,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,4.80708320073629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0,0.434589487688032,0.638002319463839,20.9758488890265,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.416564818779,0,4.64362287673365,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.745515213392595,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6801009558219,0,2.49489756515279,0,0,0,0,0,0,0,0,0.340776043570843,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,1.54095864325843,0,0,0,0.463044948647668,11.9920985208169,11.6407746702967,0,0,0.353378291891762,0.192914038270915,1.52048196587765,0,0,14.5852778965143,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,2.62035068016155,1.47856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,1999.79493531669,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0.913158720509496,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,8.07349410580417,0,0,0,0,0,0,0,0,1.28072815053259,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PSG6 | |||
}} |
Latest revision as of 10:15, 18 September 2015
Short description: | p1@PSG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG6_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000402456, ENST00000402603, NM_001031850, uc002ovf.1, uc002ovg.1, uc002ovj.1_5end |
EntrezGene: | PSG6 |
HGNC: | 9523 |
UniProt: | B5MC00B5MCE1Q00889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.12e-10 | 3 |
mesothelial cell | 4.85e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.12e-10 | 3 |
chorion | 9.57e-10 | 7 |
extraembryonic membrane | 3.56e-08 | 14 |
membranous layer | 3.56e-08 | 14 |
hepatopancreatic ampulla | 4.72e-08 | 1 |
extrahepatic bile duct | 4.72e-08 | 1 |
common bile duct | 4.72e-08 | 1 |
duodenal papilla | 4.72e-08 | 1 |
placenta | 4.90e-08 | 4 |
allantois | 4.90e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.87e-10 | 3 |
epithelioid sarcoma | 2.17e-08 | 1 |
papillary adenocarcinoma | 2.50e-08 | 1 |