FFCP PHASE1:Hg19::chr1:160990524..160990546,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:160990524..160990546,- | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_at_chr1:160990524..160990546,- | |||
|id=chr1:160990524..160990546,- | |||
|ontology_enrichment_celltype=CL:0000066!4.28e-38!254;CL:0002139!2.11e-18!24;CL:0000076!5.89e-18!62;CL:0000071!3.40e-16!18;CL:0002546!3.40e-16!18;CL:0000115!1.34e-15!35;CL:0002078!7.40e-15!44;CL:0000213!2.45e-13!57;CL:0000215!2.45e-13!57;CL:0000223!2.83e-13!59;CL:0002076!9.27e-13!43;CL:0002368!2.37e-10!13;CL:0002321!5.16e-10!248;CL:0000220!1.86e-09!246;CL:0000039!4.09e-09!7;CL:0000586!4.09e-09!7;CL:1000413!5.65e-09!9;CL:0002202!2.79e-07!9;CL:0002632!2.79e-07!9;CL:0000063!4.76e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.46e-26;7!CL:0000586;2.46e-26;7!CL:0002541;5.47e-12;3!CL:0000071;1.96e-11;18!CL:0002202;9.00e-10;9!CL:0002632;9.00e-10;9!CL:1000413;1.36e-09;9!CL:0000115;1.93e-09;36!CL:0002139;3.03e-08;24!CL:0002545;7.07e-08;2!CL:0002078;3.88e-07;45!CL:0002188;9.28e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.07e-26,7;CL:0000586,5.07e-26,7;CL:0002541,2.94e-12,3;CL:0000066,3.29e-12,253;CL:0000115,1.88e-11,36;CL:0000071,2.01e-11,18;CL:0002546,2.01e-11,18;CL:0002078,2.74e-10,45;CL:0002202,8.64e-10,9;CL:0002632,8.64e-10,9;CL:1000413,1.70e-09,9;CL:0000213,9.91e-09,58;CL:0000215,9.91e-09,58;CL:0002139,3.08e-08,24;CL:0002545,8.47e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.96e-11;18 | |||
|ontology_enrichment_disease=DOID:305!2.02e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.25e-07;22!DOID:2994;1.25e-07;22!DOID:1036;3.13e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.54e-07,22;DOID:2994,1.54e-07,22;DOID:1036,1.92e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.40e-16!18;UBERON:0004638!3.40e-16!18;UBERON:0004852!3.40e-16!18;UBERON:0000487!2.47e-15!22;UBERON:0006914!8.35e-14!25;UBERON:0003915!5.65e-09!9;UBERON:0004700!5.65e-09!9;UBERON:0001917!5.65e-09!9;UBERON:0004119!2.10e-08!169;UBERON:0000925!2.10e-08!169;UBERON:0006595!2.10e-08!169;UBERON:0005911!2.29e-08!82;UBERON:0009569!7.79e-08!113;UBERON:0005177!3.21e-07!107;UBERON:0000466!3.28e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.91e-12;33!UBERON:0003124;5.47e-12;3!UBERON:0000920;5.47e-12;3!UBERON:0000487;1.75e-11;22!UBERON:0004638;1.96e-11;18!UBERON:0001986;1.96e-11;18!UBERON:0004852;1.96e-11;18!UBERON:0006914;6.58e-10;25!UBERON:0003915;1.36e-09;9!UBERON:0004700;1.36e-09;9!UBERON:0001917;1.36e-09;9!UBERON:0005800;7.07e-08;2!UBERON:0001515;7.07e-08;2!UBERON:0000473;9.05e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.54e-13,7;UBERON:0000920,2.94e-12,3;UBERON:0000487,1.68e-11,22;UBERON:0004638,2.01e-11,18;UBERON:0001986,2.01e-11,18;UBERON:0004852,2.01e-11,18;UBERON:0006914,6.37e-10,25;UBERON:0003915,1.70e-09,9;UBERON:0004700,1.70e-09,9;UBERON:0001917,1.70e-09,9;UBERON:0005800,8.47e-08,2;UBERON:0001515,8.47e-08,2;UBERON:0000473,1.22e-07,8 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,1.47440361900905,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0.571994910780128,0,0.993812036833525,2.58070378531837,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,1.25396979922086,0,0.71153252537342,0.33472061276467,0.805658634218294,2.28081631715554,2.19655851793353,1.10298924103761,1.62028389576352,0.357198913136319,0.22452937262617,0.563057402416611,1.53316637465883,0.949265659568129,0.916008719652036,0,3.87780264148325,1.74437620857014,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0.573609190778008,0.609868530647977,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,1.26755034821831,0,0.590789906681404,0,0.860919069801795,0,0.878002283269004,1.1240175325762,0,0,0,0,1.44331342025273,0,0,0.433099343283221,0.462985512576611,0.761016608938393,0,0.858486162094873,0,0,0,0.93733833986777,2.01578553838631,0.992425680696705,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.368323955743585,0,0,0,0,0.462092022626489,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.863663664408557,0,0,0.501689773854853,0.509752546090077,0,0,0,0.261435451024901,0,0.328014645699706,0,0.515205058238611,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,0.638063562472921,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,2.17781969722645,0.282431402330337,1.29151611801369,3.36942951335251,0.886860307073351,0.229723400206959,1.52234282769651,0.764637207142375,1.70894156152249,0.238231775457789,0,0,1.08006287447623,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0.649243880549111,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,7.37804494041792,3.14151755434202,9.4523213572147,5.42301971544263,1.92354946143911,7.46248686426089,0,0,0,1.80476528493745,2.35275041181287,1.67821586975843,0.37950746544837,0.158936578980379,8.43992258112108,0.652931232636591,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0.489961987071888,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.75996244461323,0.240476460754601,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0.160753148465019,0.550157746388935,0,1.349843349309,0,0,0,0,0.0524545881349981,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,1.31348033198942,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0.57785949122191,1.50109113962448,0,0,0,0,0.179088841081487,0.617602894321944,2.19284049578707,0,0,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.11796972334774,0.550285795565037,0.231051332300676,0,0,0,0,0,0,13.619148113034,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.1531308121143,0,0,0,0,1.30013224972365,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0.111855431797792,0,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0,0,0.33883824611688,0,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0,0,0,0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| |||
|short_description=p@chr1:160990524..160990546,- | |||
}} |
Latest revision as of 23:28, 27 July 2015
Short description: | p@chr1:160990524..160990546, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160990524..160990546, - |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.07e-26 | 7 |
germ cell | 5.07e-26 | 7 |
chorionic membrane mesenchymal stem cell | 2.94e-12 | 3 |
epithelial cell | 3.29e-12 | 253 |
endothelial cell | 1.88e-11 | 36 |
blood vessel endothelial cell | 2.01e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.01e-11 | 18 |
meso-epithelial cell | 2.74e-10 | 45 |
epithelial cell of tracheobronchial tree | 8.64e-10 | 9 |
epithelial cell of lower respiratory tract | 8.64e-10 | 9 |
endothelial cell of artery | 1.70e-09 | 9 |
lining cell | 9.91e-09 | 58 |
barrier cell | 9.91e-09 | 58 |
endothelial cell of vascular tree | 3.08e-08 | 24 |
thoracic aorta endothelial cell | 8.47e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 4.54e-13 | 7 |
egg chorion | 2.94e-12 | 3 |
simple squamous epithelium | 1.68e-11 | 22 |
blood vessel endothelium | 2.01e-11 | 18 |
endothelium | 2.01e-11 | 18 |
cardiovascular system endothelium | 2.01e-11 | 18 |
squamous epithelium | 6.37e-10 | 25 |
endothelial tube | 1.70e-09 | 9 |
arterial system endothelium | 1.70e-09 | 9 |
endothelium of artery | 1.70e-09 | 9 |
segment of aorta | 8.47e-08 | 2 |
thoracic aorta | 8.47e-08 | 2 |
testis | 1.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.54e-07 | 22 |
germ cell cancer | 1.54e-07 | 22 |
chronic leukemia | 1.92e-07 | 8 |