FFCP PHASE1:Hg19::chr1:180849278..180849293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:180849278..180849293,+ | |||
|description=CAGE_peak_at_chr1:180849278..180849293,+ | |||
|id=chr1:180849278..180849293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.33e-09;2!CL:0002541;8.14e-07;3!CL:0002577;8.14e-07;3!CL:0002231;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.33e-09,2;CL:0002577,6.88e-07,3;CL:0002231,7.70e-07,3;CL:0002541,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!5.58e-07!22;UBERON:0000079!5.58e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.13e-09;8!UBERON:0003101;2.26e-07;22!UBERON:0000079;2.26e-07;22!UBERON:0003135;5.98e-07;11!UBERON:0001896;8.14e-07;3!UBERON:0002110;8.14e-07;3!UBERON:0003124;8.14e-07;3!UBERON:0000920;8.14e-07;3!UBERON:0005290;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.04e-10,7;UBERON:0000473,3.14e-09,8;UBERON:0003101,2.21e-07,22;UBERON:0000079,2.21e-07,22;UBERON:0003135,5.98e-07,11;UBERON:0002110,8.15e-07,3;UBERON:0006242,8.15e-07,3;UBERON:0001896,9.12e-07,3;UBERON:0005290,9.12e-07,3;UBERON:0010096,9.12e-07,3;UBERON:0000920,9.64e-07,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0,0.305653622991805,0.410502947249729,0.157421562627358,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.449446968890169,0,0,0,0,0.398927315243264,0,0,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0,0.632924774881769,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.487894824518382,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0.828831026872071,0,0.500170521059677,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,0.512556597022804,0,0.64341568457443,0,0.616838775210622,0.177561725313127,0.164254312027618,0,0.348631135379878,0.483437798366489,1.60405176242628,0.920809889358963,0,0,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0.178064071293475,0.495854746082934,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,2.88743956579008,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0.32681539055697,0.139423744278603,0.153900517007594,0,0,0.807818799687949,0,0,0.366390373607449,1.06606955203727,0,0.156980256395025,0.166211681900156,0,0,0.503464760927528,0,0,0.632994193584081,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0,0,0,0,0,0,0.485560759068186,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.554698692052555,0.867798691675654,0.195984794828755,0.0870592065804026,0.17472666824203,0,0,0.219267951258557,0.164230914106418,0,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,1.36885967914362,0.0801588202515337,0,0,0.288180834308212,0,0.171594997861965,0,0.124252535565433,0.942776138467182,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0.795229689809303,0.136203406111576,0.482259445395058,0.137539436597234,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0.439656701034247,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,1.14681839138014,0.110929051536852,0,0.138348634936231,0.124980407962107,0.454947352624943,0.856396000634902,0.235265819698172,0.468334905806882,0.144921028610825,0.149254802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| |||
|short_description=p@chr1:180849278..180849293,+ | |||
}} |
Latest revision as of 00:57, 28 July 2015
Short description: | p@chr1:180849278..180849293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:180849278..180849293, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.33e-09 | 2 |
placental epithelial cell | 6.88e-07 | 3 |
epithelial cell of prostate | 7.70e-07 | 3 |
chorionic membrane mesenchymal stem cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.04e-10 | 7 |
testis | 3.14e-09 | 8 |
male organism | 2.21e-07 | 22 |
male reproductive system | 2.21e-07 | 22 |
male reproductive organ | 5.98e-07 | 11 |
gallbladder | 8.15e-07 | 3 |
gall bladder primordium | 8.15e-07 | 3 |
medulla oblongata | 9.12e-07 | 3 |
myelencephalon | 9.12e-07 | 3 |
future myelencephalon | 9.12e-07 | 3 |
egg chorion | 9.64e-07 | 3 |