FFCP PHASE1:Hg19::chr1:189118891..189118896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:189118891..189118896,+ | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_at_chr1:189118891..189118896,+ | |||
|id=chr1:189118891..189118896,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.06e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.67e-09;4!CL:0002253;8.31e-09;2!CL:0002076;8.72e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.12e-09,4;CL:0002253,9.70e-09,2;CL:0000066,1.76e-08,253;CL:0000223,4.75e-08,58;CL:0002076,4.29e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.48e-21!106;DOID:0050687!4.12e-20!143;DOID:162!5.51e-19!235;DOID:14566!3.34e-18!239;DOID:299!2.89e-10!25;DOID:0050686!3.63e-09!137;DOID:7!4.18e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:299;7.01e-16;25!DOID:4468;1.48e-08;2!DOID:1036;5.12e-08;8!DOID:305;9.30e-08;106!DOID:0050687;2.92e-07;143!DOID:8692;4.84e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.22e-25,106;DOID:162,5.93e-23,235;DOID:14566,2.87e-22,239;DOID:0050687,6.97e-21,143;DOID:299,7.30e-16,25;DOID:0050686,5.39e-11,137;DOID:4468,2.00e-08,2;DOID:1036,5.08e-08,8;DOID:8692,6.26e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.04e-14!82;UBERON:0004119!2.07e-12!169;UBERON:0000925!2.07e-12!169;UBERON:0006595!2.07e-12!169;UBERON:0001007!3.19e-12!155;UBERON:0001555!3.19e-12!155;UBERON:0007026!3.19e-12!155;UBERON:0004921!1.47e-11!129;UBERON:0004185!1.47e-11!129;UBERON:0003929!3.61e-11!54;UBERON:0000077!7.77e-11!130;UBERON:0002368!1.13e-09!35;UBERON:0000949!8.21e-09!45;UBERON:0001041!6.09e-08!98;UBERON:0003350!4.84e-07!5;UBERON:0002294!9.42e-07!7;UBERON:0001173!9.42e-07!7;UBERON:0004912!9.42e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.67e-09;4!UBERON:0001262;2.67e-09;4!UBERON:0004786;2.67e-09;4!UBERON:0004808;2.67e-09;4!UBERON:0001277;2.67e-09;4!UBERON:0002394;5.37e-09;4!UBERON:0003928;5.37e-09;4!UBERON:0002294;7.81e-09;7!UBERON:0001173;7.81e-09;7!UBERON:0003350;4.76e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.12e-09,4;UBERON:0001262,3.12e-09,4;UBERON:0004786,3.12e-09,4;UBERON:0004808,3.12e-09,4;UBERON:0001277,3.12e-09,4;UBERON:0005911,4.12e-08,82;UBERON:0003350,5.27e-08,8;UBERON:0002294,8.12e-07,9;UBERON:0001173,8.12e-07,9;UBERON:0004912,8.12e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,1.53135254993501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,14.9474531748429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.870858592219,65.089747396693,83.5914199976662,0,0.278406173895242,2.46174797895425,0,0,0,0,0,2.42721043499027,1.5602073798847,0.568272293612826,0.23874448473769,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,7.09959974063882,1.07412704805365,0,0,0,7.77958931012458,0,0,0,1.5625665665114,0,0,0,3.81380475439149,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50672522863403,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,4.28631755172643,4.50943828930801,3.5242533264927,29.7913360376971,0,1.05499032264014,9.79396848954886,7.06765357169704,3.02944095638928,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,5.21032331634969,0.213452994739353,0.39961921916426,5.18725501754782,0.114536596165916,0,0,8.94618256071114,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,1.16495949527454,0.393915911536118,0.329663433524666,0.471824806979294,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,5.55790751931819,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0,1.36869470307464,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,13.7632828902083,1.69049698686902,0,0,0.861074898304078,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5665181849901,0,0,0.381382095467167,0,0,0,1.21023041222112,0.781514011233092,2.88097363929565,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0,0,0,0,0,10.8738333613251,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,1.74362138052188,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.86485443868962,0,0,0,0,0,2.57333409808316,0.198950775161368,0.594600453887843,0,0,6.34043942980029,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,5.8922799739867,11.2926358949021,0.962896400270019,0,0,0,0.631086248772738,0,0,1.0580536810308,0,0,0,3.53265989538221,0,7.72860856169766,0.101988829741982,0,0,0.250707539292375,1.74291005901951,1.33982065078089,0,0,0,0,0.0645889098360061,0.0620747142958579,5.71872499161128,0.318235791390825,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,21.8160759877412,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:189118891..189118896,+ | |||
}} |
Latest revision as of 01:35, 28 July 2015
Short description: | p@chr1:189118891..189118896, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:189118891..189118896, + |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.12e-09 | 4 |
epithelial cell of large intestine | 9.70e-09 | 2 |
epithelial cell | 1.76e-08 | 253 |
endodermal cell | 4.75e-08 | 58 |
endo-epithelial cell | 4.29e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.12e-09 | 4 |
wall of intestine | 3.12e-09 | 4 |
gastrointestinal system mucosa | 3.12e-09 | 4 |
gastrointestinal system epithelium | 3.12e-09 | 4 |
intestinal epithelium | 3.12e-09 | 4 |
endo-epithelium | 4.12e-08 | 82 |
epithelium of mucosa | 5.27e-08 | 8 |
biliary system | 8.12e-07 | 9 |
biliary tree | 8.12e-07 | 9 |
biliary bud | 8.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.22e-25 | 106 |
cancer | 5.93e-23 | 235 |
disease of cellular proliferation | 2.87e-22 | 239 |
cell type cancer | 6.97e-21 | 143 |
adenocarcinoma | 7.30e-16 | 25 |
organ system cancer | 5.39e-11 | 137 |
clear cell adenocarcinoma | 2.00e-08 | 2 |
chronic leukemia | 5.08e-08 | 8 |
myeloid leukemia | 6.26e-07 | 31 |