FFCP PHASE1:Hg19::chr1:201178479..201178492,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:201178479..201178492,+ | |||
|coexpression_cluster_id=C1256 | |||
|description=CAGE_peak_at_chr1:201178479..201178492,+ | |||
|id=chr1:201178479..201178492,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.08e-16;1!UBERON:0003918;2.49e-14;10!UBERON:0007687;2.49e-14;10!UBERON:0007123;3.76e-13;5 | |||
|ontology_enrichment_disease=DOID:154!8.50e-09!2;DOID:4236!8.50e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.09e-19!5;UBERON:0004117!1.09e-19!5;UBERON:0007689!1.09e-19!5;UBERON:0007123!1.09e-19!5;UBERON:0003091!1.09e-19!5;UBERON:0009722!2.80e-12!11;UBERON:0007690!2.80e-12!11;UBERON:0008814!7.71e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;7.00e-17;1!UBERON:0003831;7.00e-17;1!UBERON:0003898;7.00e-17;1!UBERON:0004830;7.00e-17;1!UBERON:0003830;7.00e-17;1!UBERON:0005175;7.00e-17;1!UBERON:0001774;7.00e-17;1!UBERON:0001103;7.00e-17;1!UBERON:0000989;2.08e-16;1!UBERON:0008811;2.08e-16;1!UBERON:0002046;3.76e-13;5!UBERON:0005090;4.18e-09;2!UBERON:0001630;4.18e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,6.47e-17,1;UBERON:0003831,6.47e-17,1;UBERON:0003898,6.47e-17,1;UBERON:0004830,6.47e-17,1;UBERON:0003830,6.47e-17,1;UBERON:0005175,6.47e-17,1;UBERON:0001774,6.47e-17,1;UBERON:0001103,6.47e-17,1;UBERON:0010084,6.47e-17,1;UBERON:0000989,1.65e-16,1;UBERON:0008811,1.65e-16,1;UBERON:0006258,1.65e-16,1;UBERON:0005876,1.65e-16,1;UBERON:0004874,1.65e-16,1;UBERON:0002046,4.66e-13,5;UBERON:0004117,4.66e-13,5;UBERON:0007689,4.66e-13,5;UBERON:0007123,4.66e-13,5;UBERON:0003091,4.66e-13,5;UBERON:0005090,4.02e-09,2;UBERON:0001630,4.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06395354867265,0,0,0,0,0,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0.67952103036807,0.732219924186332,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32256514013075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26705925512272,0,0,0,0,0,0,0,0,13.5808004851612,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.80682027481408,2.34454203369928,0,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0.821302454849976,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,2.24263725161227,0.12729431655633,1.0105859447911,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:201178479..201178492,+ | |||
}} |
Latest revision as of 02:05, 28 July 2015
Short description: | p@chr1:201178479..201178492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201178479..201178492, + |
Coexpression cluster: | C1256_mesothelioma_leiomyoblastoma_diaphragm_skeletal_renal_endometrial_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 6.47e-17 | 1 |
respiratory system muscle | 6.47e-17 | 1 |
skeletal muscle of trunk | 6.47e-17 | 1 |
respiratory system skeletal muscle | 6.47e-17 | 1 |
thoracic segment muscle | 6.47e-17 | 1 |
chest organ | 6.47e-17 | 1 |
muscle of trunk | 6.47e-17 | 1 |
diaphragm | 6.47e-17 | 1 |
future diaphragm | 6.47e-17 | 1 |
penis | 1.65e-16 | 1 |
intromittent organ | 1.65e-16 | 1 |
lateral plate mesenchyme | 1.65e-16 | 1 |
undifferentiated genital tubercle | 1.65e-16 | 1 |
somatopleure | 1.65e-16 | 1 |
thyroid gland | 4.66e-13 | 5 |
pharyngeal pouch | 4.66e-13 | 5 |
thyroid diverticulum | 4.66e-13 | 5 |
pharyngeal pouch 2 | 4.66e-13 | 5 |
thyroid primordium | 4.66e-13 | 5 |
muscle structure | 4.02e-09 | 2 |
muscle organ | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.71e-09 | 2 |