FFCP PHASE1:Hg19::chr1:207627697..207627708,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1380 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2336 | |||
|TSSclassifier=strong | |||
|UniProt=C9J0D9,C9JHD2 | |||
|association_with_transcript=-1bp_to_ENST00000458541_5end | |||
|cluster_id=chr1:207627697..207627708,+ | |||
|description=CAGE_peak_2_at_CR2_5end | |||
|id=chr1:207627697..207627708,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.37e-26!24;CL:0000826!2.37e-26!24;CL:0000838!6.95e-23!52;CL:0000542!2.71e-22!53;CL:0000051!2.71e-22!53;CL:0000236!1.39e-21!14;CL:0000080!5.85e-09!6;CL:0000988!4.15e-08!182;CL:0000738!3.13e-07!140;CL:0000037!4.16e-07!172;CL:0000566!4.16e-07!172;CL:0002087!5.55e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.02e-59;24!CL:0000236;1.94e-47;13!CL:0000542;3.39e-22;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.04e-59,24;CL:0000826,1.04e-59,24;CL:0000236,3.58e-52,14;CL:0000838,2.89e-32,52;CL:0000542,1.42e-31,53;CL:0000051,1.42e-31,53;CL:0000988,6.53e-13,177;CL:0002087,4.12e-12,115;CL:0002031,1.94e-11,120;CL:0000738,7.06e-11,136;CL:0000037,4.46e-10,168;CL:0002032,1.50e-09,161;CL:0000837,1.50e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000051;3.39e-22;53!UBERON:0004872;3.52e-07;7!UBERON:0001045;5.73e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.18e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.14e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.78e-12!15;UBERON:0000179!2.78e-12!15;UBERON:0000463!2.78e-12!15;UBERON:0004177!2.06e-07!7;UBERON:0003408!4.18e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.29e-12;15!UBERON:0000179;8.29e-12;15!UBERON:0000463;8.29e-12;15!UBERON:0001829;5.65e-11;2!UBERON:0002390;1.92e-10;32!UBERON:0004177;1.65e-09;5!UBERON:0005057;1.65e-09;5!UBERON:0002193;2.94e-08;42!UBERON:0001044;5.30e-08;6!UBERON:0003293;5.30e-08;6!UBERON:0003294;5.30e-08;6!UBERON:0010047;5.30e-08;6!UBERON:0003408;5.30e-08;6!UBERON:0000167;5.30e-08;6!UBERON:0002106;1.34e-07;3!UBERON:0001154;5.73e-07;1!UBERON:0001153;5.73e-07;1!UBERON:0009854;5.73e-07;1!UBERON:0000029;7.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.71e-12,15;UBERON:0000179,9.71e-12,15;UBERON:0000463,9.71e-12,15;UBERON:0001829,5.80e-11,2;UBERON:0003408,4.26e-08,10;UBERON:0001044,4.86e-08,6;UBERON:0003293,4.86e-08,6;UBERON:0003294,4.86e-08,6;UBERON:0010047,4.86e-08,6;UBERON:0000167,4.86e-08,6;UBERON:0002106,1.32e-07,3;UBERON:0004854,1.32e-07,3;UBERON:0009034,1.32e-07,3;UBERON:0002095,1.32e-07,3;UBERON:0004782,1.32e-07,3;UBERON:0003281,1.32e-07,3;UBERON:0009664,1.32e-07,3;UBERON:0002296,1.32e-07,3;UBERON:0005602,1.32e-07,3;UBERON:0001179,1.32e-07,3;UBERON:0006293,1.32e-07,3;UBERON:0001154,5.90e-07,1;UBERON:0001153,5.90e-07,1;UBERON:0001045,5.90e-07,1;UBERON:0000029,6.59e-07,1;UBERON:0004177,6.87e-07,7;UBERON:0005057,6.87e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0,0,6.97204805222715,3.69640004467296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,6.00752472388345,5.33705552318133,3.41384178053206,6.4063357925762,6.32227683949932,5.94940385506376,4.77026877267682,2.84606484554724,3.52342313622563,1.91136614062614,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0.710331756132051,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.476463550915578,0,1.29694662238543,0,0,0,0,0,0,0,4.83764534769216,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,8.28851746593443,0,0,1.23084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0.19606253431774,0,0,0.476809736941136,0,0,0.141353071433941,0,0,0.619202951523374,0,3.85477467284809,6.05463300837864,5.22109747527277,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.825236619583403,0,0,0,0.0607495566580247,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,6.94632430536731,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,2.99608367645026,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,2.91350145737546,1.4180735354187,0,0,0,0.160482733378337,0.730336388246517,2.2936464170227,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.16260037704811,0.993195428733726,0,0.0636471582781649,0,0,0,3.97377112786066,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,6.23948760132181,4.48795889224526 | |||
|short_description=p2@CR2 | |||
}} |
Latest revision as of 08:43, 20 September 2015
Short description: | p2@CR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000458541_5end |
EntrezGene: | CR2 |
HGNC: | 2336 |
UniProt: | C9J0D9C9JHD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.04e-59 | 24 |
pro-B cell | 1.04e-59 | 24 |
B cell | 3.58e-52 | 14 |
lymphoid lineage restricted progenitor cell | 2.89e-32 | 52 |
lymphocyte | 1.42e-31 | 53 |
common lymphoid progenitor | 1.42e-31 | 53 |
hematopoietic cell | 6.53e-13 | 177 |
nongranular leukocyte | 4.12e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.94e-11 | 120 |
leukocyte | 7.06e-11 | 136 |
hematopoietic stem cell | 4.46e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.50e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 9.71e-12 | 15 |
haemolymphatic fluid | 9.71e-12 | 15 |
organism substance | 9.71e-12 | 15 |
major salivary gland | 5.80e-11 | 2 |
gland of gut | 4.26e-08 | 10 |
saliva-secreting gland | 4.86e-08 | 6 |
gland of oral region | 4.86e-08 | 6 |
gland of foregut | 4.86e-08 | 6 |
oral gland | 4.86e-08 | 6 |
oral cavity | 4.86e-08 | 6 |
spleen | 1.32e-07 | 3 |
gastrointestinal system mesentery | 1.32e-07 | 3 |
stomach region | 1.32e-07 | 3 |
mesentery | 1.32e-07 | 3 |
gastrointestinal system serosa | 1.32e-07 | 3 |
mesentery of stomach | 1.32e-07 | 3 |
gut mesentery | 1.32e-07 | 3 |
dorsal mesentery | 1.32e-07 | 3 |
dorsal mesogastrium | 1.32e-07 | 3 |
peritoneal cavity | 1.32e-07 | 3 |
spleen primordium | 1.32e-07 | 3 |
vermiform appendix | 5.90e-07 | 1 |
caecum | 5.90e-07 | 1 |
midgut | 5.90e-07 | 1 |
lymph node | 6.59e-07 | 1 |
hemopoietic organ | 6.87e-07 | 7 |
immune organ | 6.87e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.14e-08 | 10 |