FFCP PHASE1:Hg19::chr1:236046843..236046855,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |||
|association_with_transcript=16bp_to_ENST00000536965_5end | |||
|cluster_id=chr1:236046843..236046855,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_8_at_LYST_5end | |||
|id=chr1:236046843..236046855,- | |||
|ontology_enrichment_celltype=CL:0000148!7.67e-14!10;CL:0000541!7.67e-14!10;CL:0000990!1.74e-10!8;CL:0002567!1.07e-09!3;CL:0000147!1.64e-09!14;CL:0000451!1.98e-08!10;CL:0000710!5.22e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.56e-74;10!CL:0000147;3.33e-53;14!CL:0002567;1.30e-46;3!CL:0000710;3.48e-37;20!CL:0000075;1.77e-27;27!CL:0002077;3.15e-19;34!CL:0002566;1.21e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.56e-74,10;CL:0000541,1.56e-74,10;CL:0000147,3.33e-53,14;CL:0002567,1.21e-46,3;CL:0000710,3.48e-37,20;CL:0000075,1.77e-27,27;CL:0002077,9.35e-22,34;CL:0000333,3.98e-17,41;CL:0002566,1.21e-16,1;CL:0000133,6.00e-12,59;CL:0000221,9.13e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.58e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!5.18e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.00e-31;2!DOID:6193;1.93e-16;1!DOID:0060060;2.63e-16;1!DOID:0060061;2.63e-16;1!DOID:8691;2.63e-16;1!DOID:3350;6.94e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.00e-31,2;DOID:6193,1.93e-16,1;DOID:0060060,2.63e-16,1;DOID:0060061,2.63e-16,1;DOID:8691,2.63e-16,1;DOID:3350,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,7.74674310364462,12.9876064689814,23.4434894420094,6.84289784090821,24.472943263391,8.10926256178577,12.0047101704843,0,0,0,0,0,1.690605505112,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.57979048707425,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.258565912723101,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,25.1737535119135,3.14011866899464,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.138258436151731,0.389720617678777,0.930053882193542,1.30852315404675,0.327609848846413,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@LYST | |||
}} |
Latest revision as of 13:25, 16 September 2015
Short description: | p8@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 16bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.56e-74 | 10 |
melanoblast | 1.56e-74 | 10 |
pigment cell | 3.33e-53 | 14 |
light melanocyte | 1.21e-46 | 3 |
neurecto-epithelial cell | 3.48e-37 | 20 |
columnar/cuboidal epithelial cell | 1.77e-27 | 27 |
ecto-epithelial cell | 9.35e-22 | 34 |
migratory neural crest cell | 3.98e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 6.00e-12 | 59 |
ectodermal cell | 9.13e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.00e-31 | 2 |
epithelioid sarcoma | 1.93e-16 | 1 |
non-Hodgkin lymphoma | 2.63e-16 | 1 |
cutaneous T cell lymphoma | 2.63e-16 | 1 |
mycosis fungoides | 2.63e-16 | 1 |
mesenchymal cell neoplasm | 6.94e-09 | 2 |