FFCP PHASE1:Hg19::chr1:27952138..27952146,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:27952138..27952146,+ | |||
|description=CAGE_peak_at_chr1:27952138..27952146,+ | |||
|id=chr1:27952138..27952146,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.68e-15!53;CL:0000051!3.68e-15!53;CL:0000838!5.39e-14!52;CL:0000945!1.21e-12!24;CL:0000826!1.21e-12!24;CL:0002087!1.94e-12!119;CL:0000037!3.40e-12!172;CL:0000566!3.40e-12!172;CL:0000738!4.25e-12!140;CL:0000988!9.26e-12!182;CL:0002031!7.78e-11!124;CL:0002032!1.49e-10!165;CL:0000837!1.49e-10!165;CL:0002368!6.63e-09!13;CL:0000068!1.31e-08!3;CL:0000069!1.31e-08!3;CL:0000307!1.31e-08!3;CL:0000377!1.31e-08!3;CL:0000623!1.38e-08!3;CL:0000825!1.38e-08!3;CL:0000063!8.29e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000307;3.11e-23;3!CL:0002368;9.69e-21;13!CL:0000946;8.01e-18;1!CL:0000786;8.01e-18;1!CL:0002202;2.83e-17;9!CL:0002632;2.83e-17;9!CL:0002328;8.38e-07;3!CL:0000945;8.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.15e-23,3;CL:0000069,5.15e-23,3;CL:0000307,5.15e-23,3;CL:0000377,5.15e-23,3;CL:0002368,9.96e-21,13;CL:0000946,5.26e-18,1;CL:0000786,5.26e-18,1;CL:0000980,5.26e-18,1;CL:0002202,2.99e-17,9;CL:0002632,2.99e-17,9;CL:0000785,1.12e-09,2;CL:0000955,1.12e-09,2;CL:0000818,1.12e-09,2;CL:0000954,1.12e-09,2;CL:0000816,1.12e-09,2;CL:0002328,6.88e-07,3;CL:0000817,7.28e-07,3;CL:0000945,7.32e-07,24;CL:0000826,7.32e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000377;3.11e-23;3!CL:0000954;1.38e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.43e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.01e-18;1!DOID:74;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.75e-18,1;DOID:74,9.46e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.27e-10;15!UBERON:0001558;1.27e-10;15!UBERON:0003126;1.57e-10;7!UBERON:0001005;1.57e-10;7!UBERON:0004815;8.38e-07;3!UBERON:0002031;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.31e-10,15;UBERON:0001558,1.31e-10,15;UBERON:0003126,1.94e-10,7;UBERON:0001005,1.94e-10,7;UBERON:0004815,6.88e-07,3;UBERON:0002031,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.57470412614962,0.157421562627358,0,0.383829398097213,0,1.83884244895785,0,0,0.542270404062111,0.710846162437108,0.587200878669695,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0.348259474598534,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.591092280605782,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.40373983744043,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,6.70302275535787,1.08890984861323,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0.185803175125719,0,0.284567373393656,0.159426272728822,0.199579371432817,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0.587954384486266,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,1.86281330544726,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:27952138..27952146,+ | |||
}} |
Latest revision as of 06:48, 28 July 2015
Short description: | p@chr1:27952138..27952146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27952138..27952146, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.15e-23 | 3 |
branched duct epithelial cell | 5.15e-23 | 3 |
tracheal epithelial cell | 5.15e-23 | 3 |
tracheoblast | 5.15e-23 | 3 |
respiratory epithelial cell | 9.96e-21 | 13 |
antibody secreting cell | 5.26e-18 | 1 |
plasma cell | 5.26e-18 | 1 |
plasmablast | 5.26e-18 | 1 |
epithelial cell of tracheobronchial tree | 2.99e-17 | 9 |
epithelial cell of lower respiratory tract | 2.99e-17 | 9 |
mature B cell | 1.12e-09 | 2 |
pre-B-II cell | 1.12e-09 | 2 |
transitional stage B cell | 1.12e-09 | 2 |
small pre-B-II cell | 1.12e-09 | 2 |
immature B cell | 1.12e-09 | 2 |
bronchial epithelial cell | 6.88e-07 | 3 |
precursor B cell | 7.28e-07 | 3 |
lymphocyte of B lineage | 7.32e-07 | 24 |
pro-B cell | 7.32e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.31e-10 | 15 |
lower respiratory tract | 1.31e-10 | 15 |
trachea | 1.94e-10 | 7 |
respiratory airway | 1.94e-10 | 7 |
lower respiratory tract epithelium | 6.88e-07 | 3 |
epithelium of bronchus | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.75e-18 | 1 |
hematopoietic system disease | 9.46e-10 | 2 |