FFCP PHASE1:Hg19::chr9:115517213..115517225,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:115517213..115517225,+
|short_description=p@chr9:115517213..115517225,+
|description=CAGE_peak_at_chr9:115517213..115517225,+
|association_with_transcript=...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:115517213..115517225,+ | |||
|description=CAGE_peak_at_chr9:115517213..115517225,+ | |||
|id=chr9:115517213..115517225,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.86e-11!180;CL:0000359!7.63e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.92e-19;7!CL:0000586;4.92e-19;7!CL:0002595;2.51e-12;5!CL:0000359;5.03e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.01e-19,7;CL:0000586,3.01e-19,7;CL:0002595,2.25e-12,5;CL:0000359,2.16e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.95e-23;10!UBERON:0005564;3.95e-23;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.54e-15;1!DOID:3095;1.08e-10;22!DOID:2994;1.08e-10;22!DOID:3350;2.00e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.75e-15,1;DOID:3095,1.03e-10,22;DOID:2994,1.03e-10,22;DOID:3350,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004573!8.27e-10!33;UBERON:0004571!8.27e-10!33;UBERON:0001637!1.09e-07!42;UBERON:0003509!1.09e-07!42;UBERON:0004572!1.09e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.68e-17;8!UBERON:0003135;2.39e-12;11!UBERON:0003834;2.51e-12;5!UBERON:0001533;2.51e-12;5!UBERON:0000991;3.45e-11;21!UBERON:0003513;4.56e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.31e-17,8;UBERON:0003135,1.75e-12,11;UBERON:0003834,2.25e-12,5;UBERON:0001533,2.25e-12,5;UBERON:0000991,3.27e-11,21;UBERON:0009196,3.27e-11,21;UBERON:0009117,3.27e-11,21;UBERON:0005564,3.27e-11,21;UBERON:0004176,1.03e-10,22;UBERON:0003513,4.21e-09,7;UBERON:0002323,9.15e-08,46;UBERON:0004458,2.77e-07,49;UBERON:0004573,3.57e-07,33;UBERON:0004571,3.57e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.111410456885174,0,0,0,0,0.520237390239513,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.870648686496336,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,0,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.538168907066586,0,0.211931901159562,0,0.412210116953756,0.515281080091258,0.18611685633159,0.675105328965065,0.389748020644795,0.252433774244115,0,0.484938170456436,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,0,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10581869652794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0.74129687641568,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,1.31535265576129,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0.664653872707185,1.323967823502,0.313932918407225,0,0,0.693373365065693,0,0,0.261177619741208,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0.147855149989634,0.477890301491107,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.79994958341972,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.828324005113957,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0,0.126698501011437,1.52983244612973,1.3360870263278,2.11358268930143,0.50141507858475,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.111410456885174,0,0,0,0,0.520237390239513,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.870648686496336,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,0,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.538168907066586,0,0.211931901159562,0,0.412210116953756,0.515281080091258,0.18611685633159,0.675105328965065,0.389748020644795,0.252433774244115,0,0.484938170456436,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,0,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10581869652794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0.74129687641568,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,1.31535265576129,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0.664653872707185,1.323967823502,0.313932918407225,0,0,0.693373365065693,0,0,0.261177619741208,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0.147855149989634,0.477890301491107,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.79994958341972,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.828324005113957,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0,0.126698501011437,1.52983244612973,1.3360870263278,2.11358268930143,0.50141507858475,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:115517213..115517225,+ | |||
}} | }} |
Latest revision as of 21:52, 31 July 2015
Short description: | p@chr9:115517213..115517225, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115517213..115517225, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.01e-19 | 7 |
germ cell | 3.01e-19 | 7 |
smooth muscle cell of the subclavian artery | 2.25e-12 | 5 |
vascular associated smooth muscle cell | 2.16e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
testis | 6.31e-17 | 8 |
male reproductive organ | 1.75e-12 | 11 |
thoracic segment blood vessel | 2.25e-12 | 5 |
subclavian artery | 2.25e-12 | 5 |
gonad | 3.27e-11 | 21 |
indifferent external genitalia | 3.27e-11 | 21 |
indifferent gonad | 3.27e-11 | 21 |
gonad primordium | 3.27e-11 | 21 |
external genitalia | 1.03e-10 | 22 |
trunk blood vessel | 4.21e-09 | 7 |
body cavity | 9.15e-08 | 46 |
body cavity or lining | 2.77e-07 | 49 |
systemic artery | 3.57e-07 | 33 |
systemic arterial system | 3.57e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.75e-15 | 1 |
germ cell and embryonal cancer | 1.03e-10 | 22 |
germ cell cancer | 1.03e-10 | 22 |
mesenchymal cell neoplasm | 2.67e-08 | 2 |