FFCP PHASE1:Hg19::chr1:9747727..9747746,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8977 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-487bp_to_ENST00000484851_5end | |||
|cluster_id=chr1:9747727..9747746,+ | |||
|description=CAGE_peak_3_at_PIK3CD_5end | |||
|id=chr1:9747727..9747746,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.10e-11!42;CL:0000860!3.75e-10!45;CL:0000144!9.83e-08!625;CL:0000012!1.21e-07!682;CL:0000003!1.77e-07!722;CL:0000221!3.71e-07!71;CL:0000548!4.05e-07!679;CL:0000004!4.05e-07!679;CL:0000255!4.05e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-17;33!CL:0002057;1.50e-17;33!CL:0002159;2.66e-11;14!CL:0000473;5.17e-11;39!CL:0000234;5.17e-11;39!CL:0002368;6.97e-09;13!CL:0000244;1.43e-08;4!CL:0000731;1.43e-08;4!CL:0002621;5.73e-08;3!CL:0002166;9.44e-08;3!CL:0000576;1.23e-07;48!CL:0000346;4.47e-07;3!CL:1000428;4.47e-07;3!CL:0002541;5.59e-07;3!CL:0002328;7.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.41e-14,42;CL:0002057,9.41e-14,42;CL:0002159,2.22e-11,14;CL:0000473,2.36e-11,48;CL:0000234,2.36e-11,48;CL:0000839,1.26e-09,66;CL:0000557,2.13e-09,67;CL:0002194,5.15e-09,59;CL:0000576,5.15e-09,59;CL:0000040,5.15e-09,59;CL:0000559,5.15e-09,59;CL:0002368,6.25e-09,13;CL:0002009,1.49e-08,61;CL:0000244,1.58e-08,4;CL:0000731,1.58e-08,4;CL:0000766,2.35e-08,72;CL:0002621,5.78e-08,3;CL:0002166,9.52e-08,3;CL:0002076,2.65e-07,42;CL:0000346,2.86e-07,3;CL:1000428,2.86e-07,3;CL:0002541,6.89e-07,3;CL:0002328,9.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.86e-10;15!UBERON:0007376;4.86e-10;15!UBERON:0000486;4.37e-08;12!UBERON:0001949;5.73e-08;3!UBERON:0010371;2.75e-07;31!UBERON:0000412;4.47e-07;3!UBERON:0001992;4.47e-07;3!UBERON:0003124;5.59e-07;3!UBERON:0000920;5.59e-07;3!UBERON:0004815;7.05e-07;3!UBERON:0002031;7.05e-07;3!UBERON:0000365;7.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.64e-10,15;UBERON:0007376,3.64e-10,15;UBERON:0007383,3.64e-10,15;UBERON:0004765,5.97e-09,90;UBERON:0001949,5.78e-08,3;UBERON:0002371,1.26e-07,76;UBERON:0001474,1.59e-07,82;UBERON:0001434,2.12e-07,100;UBERON:0000412,2.86e-07,3;UBERON:0001992,2.86e-07,3;UBERON:0000920,6.89e-07,3;UBERON:0000365,8.47e-07,5;UBERON:0004815,9.11e-07,3;UBERON:0002031,9.11e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.527533956456907,0,0,2.01697543935533,1.80808358407193,2.92124036154949,2.43966399395253,0,0,0,0,0.136874425072884,0.502170558379211,1.29902789771517,0.821005894499457,0.708397031823113,0,0,0.154816123316076,4.59710612239464,4.819294700452,1.10926203050036,0,5.68676929949686,0,0,0,0.217010870715852,0,0,0,1.45398238779565,1.88937971844405,3.88134497900506,1.85943229524548,2.46700732813095,2.78735733805593,0.28769239232215,0.256160706529101,0.945928919554341,0.689491361473237,0.645484683583826,1.35426486594342,1.50593871634084,4.36649840092553,3.37085226667627,2.75475503133812,1.92557416245656,1.91801137739712,0.329851300186716,0.797854630486527,0.426224750532694,2.32167390902867,2.8369261234557,5.60540024096017,0.502497330513487,0,1.08594422352558,2.42159801053347,3.31449872388808,4.74693581161327,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0.552700035571697,1.15921234294021,0.444859689486181,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0,0,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.472674085820339,0.221729397462564,0.614843499851882,0.0654895377488563,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,1.74437620857014,0,0,0.529636723252875,0.286836620748814,0.354668382198357,0,2.1349799145941,0.98667019366864,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0.161872944368132,0,0,0.61417158655884,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,24.1576066454121,18.0012439589951,13.1930113878942,0,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0,10.9514672630871,1.92972281457866,5.52539685409922,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,9.10927368891592,2.24803506515239,3.41798506199545,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,19.6841051372232,6.38332087155666,6.52165447314978,0.358234090811393,0.290633938513962,0.383382679165211,0,0.176096868026452,9.32976519933474,0.720599767084807,4.16600030307054,0.380987365753014,0,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.672786506072164,0.43596006883328,0.5867062865676,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,1.09970290300263,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.537182889719687,0.896681151948218,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,1.91381625495949,0,0,0.414415513436035,0,0,0,1.03985430765404,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,0.647142602455851,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.925258162815933,0,0,2.07701771673448,0.232420756919918,0,2.20557117333613,0,0.114814448164607,0,0,0,0.616122696835318,0.784349769176855,1.46139224653261,0.949964660035881,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,1.27438136522519,0.831076008928724,2.0148727924996,0,0,0,0,0,0.412164046590889,0,0,14.3566384499043,7.80072295243825,0,0.290012154876366,0.308097234229289,0,0,0.107420244868274,0,0.340906509664404,0,2.80984356113663,8.26417289669956,8.42243902464255,0.50578890427775,0,0,1.3940745403212,0,1.06461206063404,0,1.11194531462352,0.143124886741991,0.372158369359667,0,0,0.767693373934002,0,0,3.13979456079692,0.359744915166629,0,0,0.404364963146632,0,2.52755073743389,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,1.82822014178473,1.34060455107157,0,0,3.01353760869861,5.05414427002877,1.33029046061003,2.75668080248351,0,0,0,0.238231775457789,0,0,0,0,1.1750647824022,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,0,0,0,0,0.445234820091624,0,0.211125408127993,0,1.10513566212459,0,1.02268682502155,3.20020494198781,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,7.74805979759608,0,0,0,15.950057986596,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.609414446062818,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.160317640503067,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,1.57732412567589,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0.160753148465019,1.78801267576404,1.24632101408756,0,0,0,0,0,0.2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| |||
|short_description=p3@PIK3CD | |||
}} |
Latest revision as of 00:38, 20 September 2015
Short description: | p3@PIK3CD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIK3CD_5end |
Coexpression cluster: | NA |
Association with transcript: | -487bp_to_ENST00000484851_5end |
EntrezGene: | PIK3CD |
HGNC: | 8977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.41e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.41e-14 | 42 |
general ecto-epithelial cell | 2.22e-11 | 14 |
defensive cell | 2.36e-11 | 48 |
phagocyte | 2.36e-11 | 48 |
myeloid lineage restricted progenitor cell | 1.26e-09 | 66 |
granulocyte monocyte progenitor cell | 2.13e-09 | 67 |
monopoietic cell | 5.15e-09 | 59 |
monocyte | 5.15e-09 | 59 |
monoblast | 5.15e-09 | 59 |
promonocyte | 5.15e-09 | 59 |
respiratory epithelial cell | 6.25e-09 | 13 |
macrophage dendritic cell progenitor | 1.49e-08 | 61 |
transitional epithelial cell | 1.58e-08 | 4 |
urothelial cell | 1.58e-08 | 4 |
myeloid leukocyte | 2.35e-08 | 72 |
gingival epithelial cell | 5.78e-08 | 3 |
epithelial cell of Malassez | 9.52e-08 | 3 |
endo-epithelial cell | 2.65e-07 | 42 |
hair follicle dermal papilla cell | 2.86e-07 | 3 |
stem cell of epidermis | 2.86e-07 | 3 |
chorionic membrane mesenchymal stem cell | 6.89e-07 | 3 |
bronchial epithelial cell | 9.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.64e-10 | 15 |
outer epithelium | 3.64e-10 | 15 |
enveloping layer of ectoderm | 3.64e-10 | 15 |
skeletal element | 5.97e-09 | 90 |
gingival epithelium | 5.78e-08 | 3 |
bone marrow | 1.26e-07 | 76 |
bone element | 1.59e-07 | 82 |
skeletal system | 2.12e-07 | 100 |
dermal papilla | 2.86e-07 | 3 |
papillary layer of dermis | 2.86e-07 | 3 |
egg chorion | 6.89e-07 | 3 |
urothelium | 8.47e-07 | 5 |
lower respiratory tract epithelium | 9.11e-07 | 3 |
epithelium of bronchus | 9.11e-07 | 3 |