FFCP PHASE1:Hg19::chr20:25731814..25731865,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000376445_5end | |||
|cluster_id=chr20:25731814..25731865,+ | |||
|description=CAGE_peak_1_at_ENST00000376445_5end | |||
|id=chr20:25731814..25731865,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.53e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.70e-12!106;DOID:0050687!3.08e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.48e-09;14!DOID:1324;3.52e-07;15!DOID:3119;3.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.53e-16,106;DOID:0050687,2.99e-15,143;DOID:1749,2.20e-09,14;DOID:1324,3.91e-07,15;DOID:3119,4.08e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.86e-13!347;UBERON:0004119!5.89e-11!169;UBERON:0000925!5.89e-11!169;UBERON:0006595!5.89e-11!169;UBERON:0001007!2.42e-10!155;UBERON:0001555!2.42e-10!155;UBERON:0007026!2.42e-10!155;UBERON:0004921!3.46e-09!129;UBERON:0004185!3.46e-09!129;UBERON:0000064!1.50e-08!219;UBERON:0007023!4.58e-08!115;UBERON:0000475!6.49e-08!365;UBERON:0000464!2.19e-07!104;UBERON:0001004!2.44e-07!72;UBERON:0000466!2.72e-07!126;UBERON:0000077!2.74e-07!130;UBERON:0002616!4.48e-07!59;UBERON:0008947!8.86e-07!38;UBERON:0003258!8.86e-07!38 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.18e-07,145;UBERON:0001555,1.18e-07,145;UBERON:0007026,1.18e-07,145;UBERON:0004119,2.08e-07,160;UBERON:0000925,2.08e-07,160;UBERON:0006595,2.08e-07,160 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,1.34088328328186,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.738726348460727,0.612002073732759,0.313454721478088,0.572471974262113,0.273748850145768,0,0,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.309868802321207,0,1.46800219667424,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0.786839080455332,0,0.411202997999018,0.167186495390678,1.30368906653436,0.946895611469467,0,0.222820913770347,0.589211814949674,0.664601683750863,1.08321545506006,0.128091319725675,0.130059347559878,0.493313713811028,1.10540007114339,0.289803085735052,1.18629250529648,1.33770414044857,0,0.226618685395132,0,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.534880391567015,1.15859523106239,0,1.34140171940727,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,1.96468613246569,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0.937285727335186,1.24864030732128,0,0.597794722207204,0,0.161872944368132,0.140450806702248,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0.515262646192195,0,0.18611685633159,0,0.292311015483596,0.252433774244115,0.460249493211497,1.45481451136931,0.355009592516614,0.503760491138201,0.169560592310488,0.773043412653187,0,0,1.58565817968474,1.85541675650079,1.62671520017326,1.34759371519982,1.00928340350251,0,0,0,0,4.17931135228781,6.49691533502627,0.828147600278907,0.842923450390509,1.20505514941741,1.10293972732394,0.435758888184812,0.71181185733329,1.07865046528132,0.98110732562673,1.15424147083917,0.738155454624648,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,1.35287282397425,0.343135620597051,0.658501712451753,0,0.201057944823262,1.574003567695,0,0,0,0.695582429850461,0,0.144366447761074,0,0,1.58040879591855,5.15091697256924,0.246217006087397,0,0.297262324577456,0.93733833986777,1.17587489739202,2.26840155587818,0.179117045405697,1.45316969256981,0,0,0.088048434013226,0.414656231081544,0,0.75745460055828,0.317489471460845,0.381988425558278,2.34434894420094,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0.514414748524284,0,1.0656887160644,0.285955987316295,0.542621605391443,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0.394061520403854,0,0.898401253958239,0,0,1.54657762555539,0,0,0,0,0,0.49076596687656,1.50051156317903,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0,0.347534457872331,1.56640925970192,0,0.206768026122887,0.647142602455851,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,1.45031339509947,0.200506470303285,0.736647911487171,0.114814448164607,0,0.131124414959424,1.80479845162965,1.5403067420883,1.56869953835371,0,0.633309773357254,1.13733384070897,0,0,0,0,1.50506932156456,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,1.72279661398852,1.30012049207304,0,0.096670718292122,0.616194468458578,0.767518373630648,1.10269257987624,3.00776685631166,0.870100163485371,0.340906509664404,0.267096106940212,0.991709492165869,1.34533047155574,0.765676274967505,0.910420027699949,0,0.31481234683064,0,0,0,0,0,0,1.48863347743867,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0,0,1.58510321173008,0,0,0,0,0.272999822815972,0,0,0,0,0,1.73632660280006,0,0,0,0.281695602532241,0.573645408816206,0.294747123039363,0.35667105148125,0,0,1.64647446479951,0,0.349934720244983,0.577332676353072,0,1.08890984861323,0.564862804660675,0.86101074534246,0,1.7737206141467,1.83778720165568,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,9.3115282072792,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,1.19372242368845,0.296964680832639,0,2.98244294329889,0.281338832821026,0.111308705022906,0,1.47787785689595,0.796991953004279,0.552567831062295,5.03865495708552,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.371072392647405,3.99227596002388,2.60427761085233,0,0,1.593108275997,7.88186315907576,3.07303986298317,1.37897349296586,0,0,1.77148277162768,0.60298219312704,1.52581736317083,0.552896299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| |||
|short_description=p1@ENST00000376445 | |||
}} |
Latest revision as of 12:43, 28 July 2015
Short description: | p1@ENST00000376445 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000376445_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376445_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.53e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.18e-07 | 145 |
digestive tract | 1.18e-07 | 145 |
primitive gut | 1.18e-07 | 145 |
endoderm-derived structure | 2.08e-07 | 160 |
endoderm | 2.08e-07 | 160 |
presumptive endoderm | 2.08e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.53e-16 | 106 |
cell type cancer | 2.99e-15 | 143 |
squamous cell carcinoma | 2.20e-09 | 14 |
lung cancer | 3.91e-07 | 15 |
gastrointestinal system cancer | 4.08e-07 | 14 |