FFCP PHASE1:Hg19::chr20:35200140..35200151,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:35200140..35200151,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr20:35200140..35200151,- | |||
|id=chr20:35200140..35200151,- | |||
|ontology_enrichment_celltype=CL:0002322!5.13e-56!5;CL:0000039!2.40e-25!7;CL:0000586!2.40e-25!7;CL:0000540!1.44e-17!6;CL:0000031!1.44e-17!6;CL:0000404!1.44e-17!6;CL:0000047!2.50e-13!8;CL:0000148!8.36e-11!10;CL:0000541!8.36e-11!10;CL:0000147!7.32e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.34e-90;5!CL:0002321;3.59e-30;15!CL:0000540;1.17e-27;6!CL:0000404;1.17e-27;6!CL:0000148;4.98e-17;10!CL:0000147;2.34e-12;14!CL:0000039;4.27e-11;7!CL:0000586;4.27e-11;7!CL:0000710;7.87e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.35e-89,5;CL:0000540,9.34e-28,6;CL:0000031,9.34e-28,6;CL:0000404,9.34e-28,6;CL:0000047,5.16e-21,8;CL:0000148,5.26e-17,10;CL:0000541,5.26e-17,10;CL:0000147,2.44e-12,14;CL:0000039,4.27e-11,7;CL:0000586,4.27e-11,7;CL:0000133,1.38e-10,59;CL:0000710,8.08e-09,20;CL:0000221,1.08e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.17e-27;6!UBERON:0009117;4.83e-08;10!UBERON:0005564;4.83e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!2.07e-12!22;DOID:2994!2.07e-12!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.21e-34!8;UBERON:0003135!9.25e-25!11;UBERON:0000991!2.29e-18!21;UBERON:0009196!2.29e-18!21;UBERON:0009117!2.29e-18!21;UBERON:0005564!2.29e-18!21;UBERON:0004176!1.61e-17!22;UBERON:0003101!2.23e-12!22;UBERON:0000079!2.23e-12!22;UBERON:0002323!3.41e-08!46;UBERON:0003133!7.78e-08!48;UBERON:0004458!1.15e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.41e-11;49!UBERON:0000473;7.94e-10;8!UBERON:0003135;2.16e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.94e-10,8;UBERON:0003135,2.16e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,2.65059536642971,3.25343040034651,2.28054321033815,4.03713361401005,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73280352390533,2.47570985875021,3.73896304226267,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,1.1218771271618,0.534434810531121,1.01084389488329,0.752122617877125,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:35200140..35200151,- | |||
}} |
Latest revision as of 13:37, 28 July 2015
Short description: | p@chr20:35200140..35200151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35200140..35200151, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-89 | 5 |
neuron | 9.34e-28 | 6 |
neuroblast | 9.34e-28 | 6 |
electrically signaling cell | 9.34e-28 | 6 |
neuronal stem cell | 5.16e-21 | 8 |
melanocyte | 5.26e-17 | 10 |
melanoblast | 5.26e-17 | 10 |
pigment cell | 2.44e-12 | 14 |
germ line cell | 4.27e-11 | 7 |
germ cell | 4.27e-11 | 7 |
neurectodermal cell | 1.38e-10 | 59 |
neurecto-epithelial cell | 8.08e-09 | 20 |
ectodermal cell | 1.08e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 7.94e-10 | 8 |
male reproductive organ | 2.16e-07 | 11 |