FFCP PHASE1:Hg19::chr22:40471183..40471188,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:40471183..40471188,+ | |||
|coexpression_cluster_id=C474 | |||
|description=CAGE_peak_at_chr22:40471183..40471188,+ | |||
|id=chr22:40471183..40471188,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.26e-11!140;CL:0000838!2.49e-11!52;CL:0000542!7.55e-11!53;CL:0000051!7.55e-11!53;CL:0000037!8.42e-11!172;CL:0000566!8.42e-11!172;CL:0000988!1.86e-10!182;CL:0002032!6.91e-09!165;CL:0000837!6.91e-09!165;CL:0002087!3.14e-08!119;CL:0002031!4.87e-08!124;CL:0000791!1.10e-07!18;CL:0000789!1.10e-07!18;CL:0002420!1.10e-07!18;CL:0002419!1.10e-07!18;CL:0000790!1.10e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.42e-13;13!CL:0000094;1.15e-12;8!CL:0000081;4.83e-12;11!CL:0000542;2.09e-11;53!CL:0000623;1.79e-10;3!CL:0000775;6.68e-10;3!CL:0000226;7.31e-10;3!CL:0000842;7.31e-10;3!CL:0000791;1.35e-09;18!CL:0000789;1.35e-09;18!CL:0002419;1.35e-09;18!CL:0000945;3.50e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.70e-18,52;CL:0000542,1.57e-17,53;CL:0000051,1.57e-17,53;CL:0000738,4.34e-15,136;CL:0000037,1.72e-13,168;CL:0000988,2.53e-13,177;CL:0000094,1.05e-12,8;CL:0000081,3.43e-12,11;CL:0000236,5.18e-12,14;CL:0002087,8.80e-12,115;CL:0000623,1.60e-10,3;CL:0000825,1.60e-10,3;CL:0002032,1.91e-10,161;CL:0000837,1.91e-10,161;CL:0000226,4.38e-10,3;CL:0000842,4.38e-10,3;CL:0000775,5.57e-10,3;CL:0000791,7.81e-10,18;CL:0000789,7.81e-10,18;CL:0002420,7.81e-10,18;CL:0002419,7.81e-10,18;CL:0000790,7.81e-10,18;CL:0002031,4.69e-08,120;CL:0000945,5.19e-08,24;CL:0000826,5.19e-08,24;CL:0000625,8.15e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.09e-11;53!CL:0000790;1.35e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-24!115;UBERON:0001049!1.43e-15!57;UBERON:0005068!1.43e-15!57;UBERON:0006241!1.43e-15!57;UBERON:0007135!1.43e-15!57;UBERON:0002780!1.20e-14!41;UBERON:0001890!1.20e-14!41;UBERON:0006240!1.20e-14!41;UBERON:0003080!5.77e-14!42;UBERON:0002616!8.68e-13!59;UBERON:0001893!1.80e-12!34;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0002791!4.06e-12!33;UBERON:0001869!1.39e-11!32;UBERON:0000955!4.57e-11!69;UBERON:0006238!4.57e-11!69;UBERON:0002619!3.56e-10!22;UBERON:0002346!7.84e-10!90;UBERON:0001017!1.07e-09!82;UBERON:0000956!1.84e-09!25;UBERON:0000203!1.84e-09!25;UBERON:0003075!2.18e-09!86;UBERON:0007284!2.18e-09!86;UBERON:0005743!3.79e-09!86;UBERON:0001950!4.84e-09!20;UBERON:0000073!6.41e-09!94;UBERON:0001016!6.41e-09!94;UBERON:0003056!3.62e-08!61;UBERON:0000178!1.95e-07!15;UBERON:0000179!1.95e-07!15;UBERON:0000463!1.95e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.66e-11;15!UBERON:0000179;1.66e-11;15!UBERON:0000463;1.66e-11;15!UBERON:0002390;3.93e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.59e-12,15;UBERON:0000179,7.59e-12,15;UBERON:0000463,7.59e-12,15;UBERON:0001876,8.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,1.57345710739562,0.383829398097213,1.08371286321253,0,0,0.369754010166788,0.852139206383318,0.426507697462265,1.46800219667424,0,2.00544447470142,2.60413044859022,0,0.32389366601898,0.77272670290256,0.726991193897824,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0.209658645508376,0.898629049171961,0,0.16072558669708,1.14005097496499,0.19891667719909,0.547992461293902,0,1.63841583378639,0.889509253863555,5.12076267079809,2.80277190925209,1.14950487990897,0,0.954053754535364,1.1384259382189,1.17447437874188,3.44045905312706,1.32171328579026,2.24203425192614,1.05353633910031,4.13090517239049,7.07419372948497,0.616804496998528,0.334372990781356,1.95553359980154,0.473447805734733,1.94826728407911,0.668462741311041,0.294605907474837,0,0.812411591295047,0.128091319725675,0.520237390239513,0.328875809207352,1.10540007114339,0,1.63115219478266,0.267540828089713,1.04535523804977,0.453237370790265,0.383220493601921,0,0.506039384039006,0.95569624297229,1.95325036156926,0,0.602300476311091,1.53583933385302,0,0.947109008176067,0,2.41928091869679,4.81392352410313,5.79297615531196,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.654895377488563,0,0,0.324547393654683,0.348259474598534,0.26591592103773,3.10037811596945,0,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0.621984346622316,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,2.95546140302891,6.03757209606648,8.72732646702289,0,0,0,0,0,2.99602809578873,14.9580729602012,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,3.3082884179662,3.23571301227925,1.81436848265855,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,3.09701308095126,4.93634727703433,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0.649243880549111,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0,1.9882952955326,1.26602474769461,0.111308705022906,0,0.63337622438398,0.19924798825107,1.10513566212459,0.251932747854276,0,0.369254416383208,0,0.179736702294654,0,0,0.394573622547734,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.774054819518572,1.18219047581419,0,0,0,0.307801034015188,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0.442287822516696,0,1.77912677208373,0.247127877893006,0.208843899010911,0.539209063845416,0.802577647298789,0.468528891450678,1.094728735294,0,0.242780379534093,1.18375320854817,2.41981432097328,0.61214552326098,0.252746318513952,0.150323419414493,0.311064574191741,0.664653872707185,0.661983911750998,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0,0,0,0.387956065953678,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.569797163602908,0.195551382734803,0.160317640503067,0.213452994739353,0,0,0.114536596165916,1.20116498503375,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0.953423842781029,0,0.687697182986169,0,0,0.77380195455795,0.546746009922222,0,0.551639951094387,0.314727528809989,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,1.0578608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| |||
|short_description=p@chr22:40471183..40471188,+ | |||
}} |
Latest revision as of 21:29, 28 July 2015
Short description: | p@chr22:40471183..40471188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:40471183..40471188, + |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.70e-18 | 52 |
lymphocyte | 1.57e-17 | 53 |
common lymphoid progenitor | 1.57e-17 | 53 |
leukocyte | 4.34e-15 | 136 |
hematopoietic stem cell | 1.72e-13 | 168 |
hematopoietic cell | 2.53e-13 | 177 |
granulocyte | 1.05e-12 | 8 |
blood cell | 3.43e-12 | 11 |
B cell | 5.18e-12 | 14 |
nongranular leukocyte | 8.80e-12 | 115 |
natural killer cell | 1.60e-10 | 3 |
pro-NK cell | 1.60e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.91e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-10 | 161 |
single nucleate cell | 4.38e-10 | 3 |
mononuclear cell | 4.38e-10 | 3 |
neutrophil | 5.57e-10 | 3 |
mature alpha-beta T cell | 7.81e-10 | 18 |
alpha-beta T cell | 7.81e-10 | 18 |
immature T cell | 7.81e-10 | 18 |
mature T cell | 7.81e-10 | 18 |
immature alpha-beta T cell | 7.81e-10 | 18 |
hematopoietic lineage restricted progenitor cell | 4.69e-08 | 120 |
lymphocyte of B lineage | 5.19e-08 | 24 |
pro-B cell | 5.19e-08 | 24 |
CD8-positive, alpha-beta T cell | 8.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 7.59e-12 | 15 |
haemolymphatic fluid | 7.59e-12 | 15 |
organism substance | 7.59e-12 | 15 |
amygdala | 8.40e-07 | 2 |