FFCP PHASE1:Hg19::chr2:133174307..133174320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4496 | |||
|TSSclassifier=strong | |||
|UniProt=O43194 | |||
|association_with_transcript=160bp_to_ENST00000329321,NM_001508,uc002ttl.2_5end | |||
|cluster_id=chr2:133174307..133174320,+ | |||
|description=CAGE_peak_3_at_GPR39_5end | |||
|id=chr2:133174307..133174320,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.23e-12!254;CL:0000223!4.39e-08!59;CL:0002076!7.93e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.68e-08;3!CL:0000128;2.16e-07;7!CL:0000126;2.16e-07;7!CL:0000127;2.16e-07;7!CL:0002379;8.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.19e-08,3;CL:0000128,2.94e-07,7;CL:0000126,2.94e-07,7;CL:0000127,2.94e-07,7;CL:0002453,2.94e-07,7;CL:0002379,9.15e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.87e-19!106;DOID:0050687!3.27e-17!143;DOID:14566!4.99e-16!239;DOID:162!2.97e-15!235;DOID:2394!1.37e-12!14;DOID:120!2.22e-12!27;DOID:193!6.16e-12!29;DOID:1749!1.25e-07!14;DOID:299!8.50e-07!25;DOID:7!9.61e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:4929;3.82e-11;2!DOID:3620;8.41e-07;1!DOID:3565;8.41e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.80e-11,2;DOID:3620,9.15e-07,1;DOID:3565,9.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.67e-11!27;UBERON:0004119!5.88e-11!169;UBERON:0000925!5.88e-11!169;UBERON:0006595!5.88e-11!169;UBERON:0001007!7.30e-11!155;UBERON:0001555!7.30e-11!155;UBERON:0007026!7.30e-11!155;UBERON:0001048!3.36e-10!168;UBERON:0002108!8.08e-10!14;UBERON:0005409!2.62e-09!35;UBERON:0002323!5.61e-09!46;UBERON:0004458!1.12e-08!49;UBERON:0000466!1.75e-08!126;UBERON:0002114!1.89e-08!12;UBERON:0001045!2.95e-08!11;UBERON:0000464!3.93e-08!104;UBERON:0004921!4.26e-08!129;UBERON:0004185!4.26e-08!129;UBERON:0003886!5.17e-08!63;UBERON:0000992!8.49e-08!13;UBERON:0001264!1.53e-07!10;UBERON:0003922!1.53e-07!10;UBERON:0003923!1.53e-07!10;UBERON:0003924!1.53e-07!10;UBERON:0003921!1.53e-07!10;UBERON:0002075!4.61e-07!18;UBERON:0002553!7.10e-07!70;UBERON:0000077!9.72e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;5.78e-13;10!UBERON:0002075;6.70e-10;18!UBERON:0002114;1.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,7.30e-13,10;UBERON:0002075,8.05e-10,18;UBERON:0002114,7.65e-08,2;UBERON:0002323,1.20e-07,46;UBERON:0004458,4.36e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,2.57612388417951,0.958120975510189,1.00434111675842,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.61417158655884,0,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,1.38134921352481,0,1.44375896333917,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,1.47586126251736,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.22001485746285,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,1.45031339509947,0,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,1.52925763827023,0.831076008928724,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.382838137483752,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,1.116475108079,0.316379424718726,0,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0.294747123039363,0,0,0,0.329294892959902,0.379473173765715,0,0.384888450902048,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0.307160702099232,0,0,2.56010021552684,0.329607748453519,0.211125408127993,0,0.552567831062295,0.503865495708552,2.14764233254525,0,0,0.808815160325942,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0.69169171316418,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.68798451622422,0.326465616318295,3.25112064298064,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,2.65861549082874,1.323967823502,1.2557316736289,3.58417289318877,0.569219092059585,0,0.867798691675654,0.0979923974143777,0.783532859223623,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0,0,0,0.411125773940253,1.39100228192093,0,0.586654148204409,0.240476460754601,0.426905989478705,0,0.864542502924636,0,0.171594997861965,0.14405479798815,0.869767748958028,0.235694034616795,0,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,1.5452198671947,0,0,0.157566364614447,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.844802692155252,0,1.72723677587501,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.855434189421647,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0.249960815924213,0,0,2.35265819698172,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0.302461847526478,0.466311601748341,0,0.477890301491107,4.04822800947244,0.621051827505038,2.48823724704513,0.53168342911599,0.521745061811734,0.601030435988874,1.14241563650639,0.406870733204662,0.545545977607678,1.07410557042488,0.928067519756987,0.398095888698616,0,0,0,0,0.385239660814607,0,0,0.226705925512272,0.926089897295336,0.97894681802587,0,0,0.438568099157414,0.530067437837643,0,0,0,0,0.607719912354764,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,6.60516955794765,0,0,0.850299680406731,0,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0.366857197043358,0.231051332300676,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0.781514011233092,0.261906694481422,0.49131575253029,1.33070477595341,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.514464028312255,0,0,0.236387681767936,1.22354542081276,0,0,0.560544326627578,0.913158720509496,0.863710364874486,2.38875843943525,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0.354996002191696,0.511280428554946,0,0,1.24082554265728,0,0.447421727191169,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,0.301925687133347,0.385870790539723,0.655678681511872,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,1.20362050033752,0,0,0,0,0,0,1.5870805215462,0,0,2.16313281061895,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0.784923038064294,0.190941474834495,0,0,0,0,0,0,1.30245229777559,1.70763753404345,1.9307228228694,1.16772762738563,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p3@GPR39 | |||
}} |
Latest revision as of 00:27, 17 September 2015
Short description: | p3@GPR39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR39_5end |
Coexpression cluster: | NA |
Association with transcript: | 160bp_to_ENST00000329321, NM_001508, uc002ttl.2_5end |
EntrezGene: | GPR39 |
HGNC: | 4496 |
UniProt: | O43194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.19e-08 | 3 |
oligodendrocyte | 2.94e-07 | 7 |
macroglial cell | 2.94e-07 | 7 |
astrocyte | 2.94e-07 | 7 |
oligodendrocyte precursor cell | 2.94e-07 | 7 |
meningothelial cell | 9.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pancreas | 7.30e-13 | 10 |
viscus | 8.05e-10 | 18 |
duodenum | 7.65e-08 | 2 |
body cavity | 1.20e-07 | 46 |
body cavity or lining | 4.36e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.80e-11 | 2 |
central nervous system cancer | 9.15e-07 | 1 |
meningioma | 9.15e-07 | 1 |