FFCP PHASE1:Mm9::chr10:128181849..128181878,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128181849..128181878,+|id=chr10:128181849..128181878,+|ontology_enrichment_celltype=CL:0002563!2.80e-10!9;CL:0002251!2.80e-10!9;CL:0000239!2.09e-07!6;CL:0000677!2.09e-07!6;CL:0000212!2.09e-07!6;CL:0000584!2.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.94e-22,9;CL:0002251,6.94e-22,9;CL:0000239,3.42e-15,6;CL:0000677,3.42e-15,6;CL:0000584,3.42e-15,6;CL:0000075,6.18e-13,7;CL:0000066,1.56e-12,25;CL:0002076,1.66e-12,15;CL:0000223,5.43e-09,20;CL:0000682,2.29e-08,3;CL:0002250,2.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.16e-17!15;UBERON:0004923!2.04e-15!24;UBERON:0001242!1.03e-14!13;UBERON:0000060!1.03e-14!13;UBERON:0001262!1.03e-14!13;UBERON:0004786!1.03e-14!13;UBERON:0005409!1.95e-13!59;UBERON:0000160!2.30e-12!43;UBERON:0001007!6.49e-12!128;UBERON:0001555!6.49e-12!128;UBERON:0007026!6.49e-12!128;UBERON:0004119!1.77e-11!130;UBERON:0000925!1.77e-11!130;UBERON:0006595!1.77e-11!130;UBERON:0004921!1.20e-10!126;UBERON:0004185!1.20e-10!126;UBERON:0003350!2.80e-10!9;UBERON:0004808!2.80e-10!9;UBERON:0001277!2.80e-10!9;UBERON:0002193!5.83e-09!48;UBERON:0000485!6.42e-08!11;UBERON:0004177!1.26e-07!29;UBERON:0002390!5.40e-07!45;UBERON:0003061!5.40e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.45e-37,15;UBERON:0000160,4.34e-34,31;UBERON:0001242,2.88e-32,13;UBERON:0001262,2.88e-32,13;UBERON:0004786,2.88e-32,13;UBERON:0005409,3.06e-23,47;UBERON:0004923,4.42e-22,24;UBERON:0003350,6.94e-22,9;UBERON:0004808,6.94e-22,9;UBERON:0001277,6.94e-22,9;UBERON:0000485,1.27e-17,11;UBERON:0002108,2.30e-11,4;UBERON:0000331,4.44e-09,3;UBERON:0002116,4.44e-09,3;UBERON:0001204,4.44e-09,3;UBERON:0001168,4.44e-09,3;UBERON:0002465,1.34e-08,3;UBERON:0001007,2.35e-08,116;UBERON:0001555,2.35e-08,116;UBERON:0007026,2.35e-08,116;UBERON:0004119,3.99e-08,118;UBERON:0000925,3.99e-08,118;UBERON:0006595,3.99e-08,118;UBERON:0004921,9.79e-07,114|phase1_expression=0,4.88565570695105,1.81999695755814,3.93203474698879,4.50806156951712,2.01455126294268,1.86890112476421,0.387369970324729,0.422366166455,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.0874204024189974,0,0.404950534779652,0,6.46697438984387,6.58149281307546,5.94145512517242,0.255129870453209,0.0992909512008853,0.261199789138935,5.27974995218242,3.21172993494038,4.01962374880514,2.58457197695445,2.37018355954478,11.7814520062952,6.80481350351813,1.33038306393183,0,0,0,3.46621943701529,2.49351968037739,2.45003227514843,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.969750506270444,3.72783522436244,0,0,6.38642638021478,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,7.59963200862735,2.64450566663544,0,0,0,0.201683524623343,0.22237804384487,0,2.84717436926707,0.329397909448022,0,0.596869416123452,0.58489226135736,2.69645822596266,7.78096979548899,4.77939055810481,0,0,0,0,0,0,0,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,2.91480836629851,0,0.854354403989263,0,0.185194527369712,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,4.40690909192096,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.194915761479505,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:128181849..128181878,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:128181849..128181878,+ | |||
|description=CAGE_peak_at_chr10:128181849..128181878,+ | |||
|id=chr10:128181849..128181878,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.80e-10!9;CL:0002251!2.80e-10!9;CL:0000239!2.09e-07!6;CL:0000677!2.09e-07!6;CL:0000212!2.09e-07!6;CL:0000584!2.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.94e-22,9;CL:0002251,6.94e-22,9;CL:0000239,3.42e-15,6;CL:0000677,3.42e-15,6;CL:0000584,3.42e-15,6;CL:0000075,6.18e-13,7;CL:0000066,1.56e-12,25;CL:0002076,1.66e-12,15;CL:0000223,5.43e-09,20;CL:0000682,2.29e-08,3;CL:0002250,2.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.16e-17!15;UBERON:0004923!2.04e-15!24;UBERON:0001242!1.03e-14!13;UBERON:0000060!1.03e-14!13;UBERON:0001262!1.03e-14!13;UBERON:0004786!1.03e-14!13;UBERON:0005409!1.95e-13!59;UBERON:0000160!2.30e-12!43;UBERON:0001007!6.49e-12!128;UBERON:0001555!6.49e-12!128;UBERON:0007026!6.49e-12!128;UBERON:0004119!1.77e-11!130;UBERON:0000925!1.77e-11!130;UBERON:0006595!1.77e-11!130;UBERON:0004921!1.20e-10!126;UBERON:0004185!1.20e-10!126;UBERON:0003350!2.80e-10!9;UBERON:0004808!2.80e-10!9;UBERON:0001277!2.80e-10!9;UBERON:0002193!5.83e-09!48;UBERON:0000485!6.42e-08!11;UBERON:0004177!1.26e-07!29;UBERON:0002390!5.40e-07!45;UBERON:0003061!5.40e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.45e-37,15;UBERON:0000160,4.34e-34,31;UBERON:0001242,2.88e-32,13;UBERON:0001262,2.88e-32,13;UBERON:0004786,2.88e-32,13;UBERON:0005409,3.06e-23,47;UBERON:0004923,4.42e-22,24;UBERON:0003350,6.94e-22,9;UBERON:0004808,6.94e-22,9;UBERON:0001277,6.94e-22,9;UBERON:0000485,1.27e-17,11;UBERON:0002108,2.30e-11,4;UBERON:0000331,4.44e-09,3;UBERON:0002116,4.44e-09,3;UBERON:0001204,4.44e-09,3;UBERON:0001168,4.44e-09,3;UBERON:0002465,1.34e-08,3;UBERON:0001007,2.35e-08,116;UBERON:0001555,2.35e-08,116;UBERON:0007026,2.35e-08,116;UBERON:0004119,3.99e-08,118;UBERON:0000925,3.99e-08,118;UBERON:0006595,3.99e-08,118;UBERON:0004921,9.79e-07,114 | |||
|phase1_expression=0,4.88565570695105,1.81999695755814,3.93203474698879,4.50806156951712,2.01455126294268,1.86890112476421,0.387369970324729,0.422366166455,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.0874204024189974,0,0.404950534779652,0,6.46697438984387,6.58149281307546,5.94145512517242,0.255129870453209,0.0992909512008853,0.261199789138935,5.27974995218242,3.21172993494038,4.01962374880514,2.58457197695445,2.37018355954478,11.7814520062952,6.80481350351813,1.33038306393183,0,0,0,3.46621943701529,2.49351968037739,2.45003227514843,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.969750506270444,3.72783522436244,0,0,6.38642638021478,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,7.59963200862735,2.64450566663544,0,0,0,0.201683524623343,0.22237804384487,0,2.84717436926707,0.329397909448022,0,0.596869416123452,0.58489226135736,2.69645822596266,7.78096979548899,4.77939055810481,0,0,0,0,0,0,0,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,2.91480836629851,0,0.854354403989263,0,0.185194527369712,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,4.40690909192096,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.194915761479505,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:128181849..128181878,+ | |||
}} |
Latest revision as of 03:11, 4 August 2015
Short description: | p@chr10:128181849..128181878, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128181849..128181878, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.94e-22 | 9 |
epithelial cell of alimentary canal | 6.94e-22 | 9 |
brush border epithelial cell | 3.42e-15 | 6 |
gut absorptive cell | 3.42e-15 | 6 |
enterocyte | 3.42e-15 | 6 |
columnar/cuboidal epithelial cell | 6.18e-13 | 7 |
epithelial cell | 1.56e-12 | 25 |
endo-epithelial cell | 1.66e-12 | 15 |
endodermal cell | 5.43e-09 | 20 |
M cell of gut | 2.29e-08 | 3 |
intestinal crypt stem cell | 2.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.45e-37 | 15 |
intestine | 4.34e-34 | 31 |
intestinal mucosa | 2.88e-32 | 13 |
wall of intestine | 2.88e-32 | 13 |
gastrointestinal system mucosa | 2.88e-32 | 13 |
gastrointestinal system | 3.06e-23 | 47 |
organ component layer | 4.42e-22 | 24 |
epithelium of mucosa | 6.94e-22 | 9 |
gastrointestinal system epithelium | 6.94e-22 | 9 |
intestinal epithelium | 6.94e-22 | 9 |
simple columnar epithelium | 1.27e-17 | 11 |
small intestine | 2.30e-11 | 4 |
ileal mucosa | 4.44e-09 | 3 |
ileum | 4.44e-09 | 3 |
mucosa of small intestine | 4.44e-09 | 3 |
wall of small intestine | 4.44e-09 | 3 |
lymphoid system | 1.34e-08 | 3 |
digestive system | 2.35e-08 | 116 |
digestive tract | 2.35e-08 | 116 |
primitive gut | 2.35e-08 | 116 |
endoderm-derived structure | 3.99e-08 | 118 |
endoderm | 3.99e-08 | 118 |
presumptive endoderm | 3.99e-08 | 118 |
subdivision of digestive tract | 9.79e-07 | 114 |