FFCP PHASE1:Hg19::chr2:2746794..2746795,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:2746794..2746795,- | |||
|description=CAGE_peak_at_chr2:2746794..2746795,- | |||
|id=chr2:2746794..2746795,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.04e-34;2!CL:0002543;2.45e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,2.45e-12,6;CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.80e-46!34;UBERON:0002020!6.40e-46!34;UBERON:0003528!6.40e-46!34;UBERON:0001869!3.06e-44!32;UBERON:0002791!1.70e-42!33;UBERON:0002780!1.03e-37!41;UBERON:0001890!1.03e-37!41;UBERON:0006240!1.03e-37!41;UBERON:0003080!9.88e-37!42;UBERON:0001049!2.68e-35!57;UBERON:0005068!2.68e-35!57;UBERON:0006241!2.68e-35!57;UBERON:0007135!2.68e-35!57;UBERON:0002616!5.96e-34!59;UBERON:0002619!4.12e-33!22;UBERON:0001950!3.17e-31!20;UBERON:0000955!9.58e-31!69;UBERON:0006238!9.58e-31!69;UBERON:0001017!2.23e-30!82;UBERON:0000956!5.77e-29!25;UBERON:0000203!5.77e-29!25;UBERON:0005743!9.78e-29!86;UBERON:0000073!7.15e-28!94;UBERON:0001016!7.15e-28!94;UBERON:0003056!4.11e-24!61;UBERON:0003075!4.27e-24!86;UBERON:0007284!4.27e-24!86;UBERON:0002346!8.37e-23!90;UBERON:0000369!1.29e-20!4;UBERON:0002435!1.29e-20!4;UBERON:0000204!1.29e-20!4;UBERON:0010082!1.29e-20!4;UBERON:0007023!1.30e-20!115;UBERON:0002308!4.66e-19!9;UBERON:0000125!4.66e-19!9;UBERON:0000033!7.92e-17!123;UBERON:0005383!5.17e-16!3;UBERON:0005382!5.17e-16!3;UBERON:0000153!8.30e-16!129;UBERON:0007811!8.30e-16!129;UBERON:0000988!4.15e-14!3;UBERON:0002420!1.11e-13!9;UBERON:0007245!1.11e-13!9;UBERON:0010009!1.11e-13!9;UBERON:0010011!1.11e-13!9;UBERON:0000454!1.11e-13!9;UBERON:0000200!1.25e-13!6;UBERON:0004121!3.73e-13!169;UBERON:0000924!1.00e-12!173;UBERON:0006601!1.00e-12!173;UBERON:0009663!7.95e-12!7;UBERON:0001873!4.27e-11!2;UBERON:0010122!4.27e-11!2;UBERON:0001871!4.69e-10!7;UBERON:0002148!5.04e-10!2;UBERON:0009662!5.04e-10!2;UBERON:0001872!1.68e-09!5;UBERON:0002021!4.43e-09!5;UBERON:0000349!4.82e-09!5;UBERON:0000025!6.86e-09!194;UBERON:0002771!1.15e-07!3;UBERON:0006331!5.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.39e-66;1!UBERON:0005383;3.27e-23;3!UBERON:0005382;3.27e-23;3!UBERON:0000369;8.69e-18;4!UBERON:0002435;8.69e-18;4!UBERON:0000204;8.69e-18;4!UBERON:0009663;8.99e-11;7!UBERON:0001638;1.12e-08;9!UBERON:0003920;1.12e-08;9!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0010011;1.12e-08;9!UBERON:0004582;1.12e-08;9!UBERON:0000454;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.23e-66,1;UBERON:0005383,2.62e-23,3;UBERON:0005382,2.62e-23,3;UBERON:0000369,7.35e-18,4;UBERON:0002435,7.35e-18,4;UBERON:0000204,7.35e-18,4;UBERON:0010082,7.35e-18,4;UBERON:0009663,8.16e-11,7;UBERON:0002420,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0001638,1.12e-08,9;UBERON:0003920,1.12e-08,9;UBERON:0004582,1.12e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.645902582527404,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,1.57115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:2746794..2746795,- | |||
}} |
Latest revision as of 09:09, 29 July 2015
Short description: | p@chr2:2746794..2746795, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:2746794..2746795, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 2.45e-12 | 6 |
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
putamen | 1.23e-66 | 1 |
caudate-putamen | 2.62e-23 | 3 |
dorsal striatum | 2.62e-23 | 3 |
corpus striatum | 7.35e-18 | 4 |
striatum | 7.35e-18 | 4 |
ventral part of telencephalon | 7.35e-18 | 4 |
future corpus striatum | 7.35e-18 | 4 |
telencephalic nucleus | 8.16e-11 | 7 |
basal ganglion | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nuclear complex of neuraxis | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
aggregate regional part of brain | 1.04e-08 | 9 |
collection of basal ganglia | 1.04e-08 | 9 |
cerebral subcortex | 1.04e-08 | 9 |
vein | 1.12e-08 | 9 |
venous blood vessel | 1.12e-08 | 9 |
venous system | 1.12e-08 | 9 |