FFCP PHASE1:Hg19::chr9:21971016..21971030,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:21971016..21971030,-
|short_description=p18@CDKN2A
|description=CAGE_peak_18_at_CDKN2A_5end
|association_with_transcript=176bp_to_ENST00000479692_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=176bp_to_ENST00000479692_5end | |||
|cluster_id=chr9:21971016..21971030,- | |||
|description=CAGE_peak_18_at_CDKN2A_5end | |||
|id=chr9:21971016..21971030,- | |||
|ontology_enrichment_celltype=CL:0000066!1.43e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.34e-07;1!CL:0002625;1.34e-07;1!CL:1001319;1.34e-07;1!CL:1000600;1.34e-07;1!CL:0002568;1.34e-07;1!CL:0000216;1.34e-07;1!CL:0000362;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.96e-08,1;CL:1000600,5.96e-08,1;CL:0002568,6.37e-08,1;CL:0000511,8.84e-08,1;CL:0002625,8.84e-08,1;CL:0000216,8.84e-08,1;CL:0000362,6.44e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.34e-11!106;DOID:0050687!7.88e-10!143;DOID:162!3.93e-07!235;DOID:14566!4.76e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:225;1.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,9.44e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.33e-10!9;UBERON:0000063!8.59e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.34e-07;1!UBERON:0001343;1.34e-07;1!UBERON:0004645;1.34e-07;1!UBERON:0004913;1.34e-07;1!UBERON:0003703;1.34e-07;1!UBERON:0004910;1.34e-07;1!UBERON:0004813;1.34e-07;1!UBERON:0001256;1.34e-07;1!UBERON:0001259;1.34e-07;1!UBERON:0001174;1.34e-07;1!UBERON:0004914;1.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.58e-08,1;UBERON:0003703,5.58e-08,1;UBERON:0001174,5.58e-08,1;UBERON:0004914,5.58e-08,1;UBERON:0004645,5.96e-08,1;UBERON:0001256,5.96e-08,1;UBERON:0001259,5.96e-08,1;UBERON:0001136,8.84e-08,1;UBERON:0001343,8.84e-08,1;UBERON:0004910,8.84e-08,1;UBERON:0005154,8.84e-08,1;UBERON:0005295,8.84e-08,1;UBERON:0004813,8.84e-08,1;UBERON:0005297,8.84e-08,1;UBERON:0005294,8.84e-08,1;UBERON:0010141,8.84e-08,1;UBERON:0005891,8.84e-08,1;UBERON:0004122,5.97e-07,15 | |||
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| ||
|short_description=p18@CDKN2A | |||
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Latest revision as of 23:11, 16 September 2015
Short description: | p18@CDKN2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 176bp_to_ENST00000479692_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.96e-08 | 1 |
lower urinary tract cell | 5.96e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 6.37e-08 | 1 |
androgen binding protein secreting cell | 8.84e-08 | 1 |
seminiferous tubule epithelial cell | 8.84e-08 | 1 |
Sertoli cell | 8.84e-08 | 1 |
epidermal cell | 6.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.58e-08 | 1 |
extrahepatic bile duct | 5.58e-08 | 1 |
common bile duct | 5.58e-08 | 1 |
duodenal papilla | 5.58e-08 | 1 |
urinary bladder urothelium | 5.96e-08 | 1 |
wall of urinary bladder | 5.96e-08 | 1 |
mucosa of urinary bladder | 5.96e-08 | 1 |
mesothelium | 8.84e-08 | 1 |
seminiferous tubule of testis | 8.84e-08 | 1 |
epithelium of male gonad | 8.84e-08 | 1 |
epithelial cord | 8.84e-08 | 1 |
sex cord | 8.84e-08 | 1 |
seminiferous tubule epithelium | 8.84e-08 | 1 |
testis sex cord | 8.84e-08 | 1 |
genital ridge | 8.84e-08 | 1 |
primitive sex cord of indifferent gonad | 8.84e-08 | 1 |
coelomic epithelium | 8.84e-08 | 1 |
genitourinary system | 5.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
syndrome | 9.44e-08 | 1 |